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In press
Lee, J. S., B. A. Berejikian. In press. Structural complexity in relation to the habitat preferences, territoriality, and hatchery rearing of juvenile China rockfish (Sebastes nebulosus). Environmental Biology of Fishes, 84:411-419.
Top of Page
2009
Berejikian, B. A., D. M. Van Doornik, J. A. Scheurer, R. Bush. 2009. Reproductive behavior and relative reproductive success of natural - and - hatchery - origin Hood Canal summer chum slamon (Oncorhynchus keta). Canadian Journal of Fisheries and Aquatic Sciences, 66:781789.
Tatara, C. P., S. Riley, J. A. Scheurer. 2009. Growth, survival, and habitat use of naturally reared and hatchery steelhead fry in streams: effects of an enriched hatchery rearing environment. Transactions of the American Fisheries Society, 138(3):447.
Tatara, C. P. 2009. Size at implantation affects growth of juvenile steelhead implanted with 12-mm passive integrated transponders. North American Journal of Fisheries Management, 29(2):417.
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2008
Araki, H., B. A. Berejikian, M. J. Ford, M. Blouin. 2008. Fitness of hatchery-reared salmonids in the wild. Evolutionary Applications, 1:342-355.
Berejikian, B. A., T. Johnson, R. Endicott, J. Lee. 2008. Increases in Steelhead Redd Abundance Resulting from Two Conservation Hatchery Strategies in the Hamma Hamma River, WA. Canadian Journal of Fisheries and Aquatic Sciences, 65:754-764.
Galbreath, P. F., C. A. Beasley, B. A. Berejikian, R. W. Carmichael, D. E. Fast, M. J. Ford, J. A. Hesse, L. L. McDonald, A. R. Murdoch, C. M. Peven, D. A. Venditti. 2008. Recommendations for Broad Scale Monitoring to Evaluate the Effects of Hatchery Supplementation on the Fitness of Natural Salmon and Steelhead Populations. Final Draft Report of the Ad Hoc Supplementation Monitoring and Evaluation Workgroup. Fish Science Department, Columbia River Inter-Tribal Fish Commission; Quantitative Consultants, Inc.; Northwest Fisheries Science Center, NOAA Fisheries; Oregon Department of Fish and Wildlife; Yakima Klickitat Fisheries Project, Yakima Nation; Department of Fisheries, Nex Perce Tribe; Western Ecosystems Technology, Inc.; Washington Department of Fish and Wildlife; Fisheries Program, Chalan Public Utility District; Idaho Department of Fish and Game.
Kiffney, P. M., G. R. Pess, J. H. Anderson, K. Burton, P. Faulds, S. Riley. 2008. Changes in fish communities following recolonization of the Cedar River, WA, USA by Pacific salmon after 103 years of local extirpation. River research and applications.
Lee, J. S., B. A. Berejikian. 2008. Behavioural Syndrome Stability without Stability of Individual Behaviour: Consequences for Rockfish Stock Enhancement. Environmental Biology of Fishes, 82(2):179-186.
Lee, J. S., B. A. Berejikian. 2008. Effects of the Rearing Environment on Average Behavior and Behavioral Variation in Steelhead. Journal of Fish Biology, 72:1736-1749.
Swanson, P., B. Campbell, K. D. Shearer, J. Dickey, B. R. Beckman, D. A. Larsen, L. K. Park, B. Berijikian. 2008. Application of Reproductive Technologies to Captive Breeding Programs for Converservation of Imperiled Stocks of Pacific Salmon. Cybium, 32(2, suppl.):279-282.
Tatara, C. P., S. Riley, J. A. Scheurer. 2008. Environmental enrichment in steelhead (Oncorhynchus mykiss) hatcheries: field evaluation of aggression, foraging and territoriality in natural and hatchery fry. Canadian Journal of Fisheries and Aquatic Sciences, 65(4):744-753.
Top of Page
2007
Berejikian, B. A., R. S. Brown, C. P. Tatara, S. J. Cooke. 2007. Effects of telemetry transmitter placement on egg retention of naturally spawning captively reared steelhead. North American Journal of Fisheries Management, 27:659-664.
Berejikian, B. A., R. Endicott, D. M. VanDoornik, R. S. Brown, C. P. Tatara, J. Atkins. 2007. Spawning by female Chinook salmon can be detected by electromyogram telemetry. Transactions of the American Fisheries Society, 136:593-605.
Brown, R.S., C.P. Tatara, J.R. Stephenson, and B.A. Berejikian. 2007. Evaluation of a new coded electromyogram transmitter for studying swimming behavior and energetics in fish. North American Journal of Fisheries Management 27:765-772.
Hard, J. J., J. M. Myers, M. J. Ford, R. G. Kope, G. R. Pess, R. S. Waples, G. A. Winans, B. A. Berejikian, F. W. Waknitz, P. B. Adams, P. A. Bisson, D. E. Campton, R. Reisenbichler. 2007. Status review of Puget Sound steelhead (Oncorhynchus mykiss). U.S. Dept. of Commerce, NOAA Tech. Memo., NMFS-NWFSC-81, 117 p.
Massee, K. C., J. Kim, B. A. Berejikian, R. W. Hardy. 2007. Prey selection and efficiency of naïve and experienced juvenile sockeye salmon (Oncorhynchus nerka). Journal of Fish Biology, 70:1213-1223.
Scheurer, J. A., B. A. Berejikian, F. P. Thrower, E. R. Ammann, T. A. Flagg. 2007. Innate predator recognition and fright response in related populations of Oncorhynchus mykiss under different predation pressure. Journal of Fish Biology, 70:1057-1069.
Top of Page
2006
Fairgrieve, W. T., C. L. Masada, M. E. Peterson, W. C. McAuley, G. C. McDowell, M. S. Strom. 2006. Concentrations of erythromycin and azithromycin in mature Chinook salmon (Oncorhynchus tshawytscha) after intraperitoneal injection, and in their progeny. Diseases of Aquatic Organisms, 68:227-234.
Top of Page
2005
Berejikian, B. A., E. P. Tezak. 2005. Male size effects on fertilization success: lack of evidence in chinook salmon spawning under experimental conditions. Environmental Biology of Fishes, 72:235-240.
Berejikian, B. A., E. P. Tezak. 2005. Rearing in enriched hatchery tanks improves dorsal fin quality of juvenile steelhead. North American Journal of Aquaculture, 67:289-293.
Berejikian, B. A., P. Kline, T. A. Flagg. 2005. Release of captively reared adult anadromous salmonids for population maintenance and recovery: biological trade-offs and management considerations. Pages 233-245 in Nickum, M., P. Mazik, J. Nickum, D. MacKinlay. (Eds.) Propagated fish in resource management. American Fisheries Society Symposium 44. American Fisheries Society, Bethesda, Maryland.
Berejikian, B. A., D. M. Van Doornik, A. LaRae, E. P. Tezak, J. Lee. 2005. The effects of exercise on behavior and reproductive success of captively reared steelhead. Transactions of the American Fisheries Society, 134:1236-1252.
Fairgrieve, W. T., C. L. Masada, W. C. McAuley, M. E. Peterson, M. S. Myers, M. S. Strom. 2005. Accumulation and clearance of orally administered erythromycin and its derivative, azithromycin, in juvenile fall Chinook salmon (Oncorhynchus tshawytscha). Diseases of Aquatic Organisms, 64:99-106.
Flagg, T. A., C. W. McAuley, P. Kline, M. S. Powell, D. Taki, J. C. Gislason. 2005. Application of captive broodstocks to preservation of ESA-listed stocks of Pacific Salmon: Redfish Lake sockeye salmon case example. Pages 387-400 in Nickum, M., P. Mazik, J. Nickum, D. MacKinlay. (Eds.) Propagated fish in resource management. American Fisheries Society Symposium 44. American Fisheries Society, Bethesda, Maryland.
Flagg, T. A., H. A. Pollard. 2005. Guidelines for use of Captive Broodstocks in Recovery Efforts for Pacific Salmon. Pages 333-345 in Nickum, M., P. Mazik, J. Nickum, D. MacKinlay. (Eds.) Propagated fish in resource management. American Fisheries Society Symposium 44. American Fisheries Society, Bethesda, Maryland.
Hard, J.J., and K.A. Naish. 2005. Evaluate effects of inbreeding and inbreeding depression. In B.A. Berejikian (editor), Research on captive broodstock programs for Pacific salmon, 2004-2005 Annual report, Project No. 199305600, p. 138-160. Available Bonneville Power Administration (BPA Report DOE/BP-00017690-1, 162 electronic pages), Environment Fish and Wildlife, P.O. Box 3621, Portland, OR 97208.
Hard, J. J., J. M. Myers, M. J. Ford, R. G. Kope, G. R. Pess, R. S. Waples, G. A. Winans, B. A. Berejikian, F. W. Waknitz, P. B. Adams, P. A. Bisson, D. E. Campton, R. Reisenbichler. 2005. Status review update for Puget Sound steelhead. Report submitted to NOAA/NMFS Northwest Regional Office, Seattle, Washington, 26 July 2005, 70 p. + 4 appendices.
Kuligowski, D. R., M. J. Ford, B. A. Berejikian. 2005. Breeding structure of steelhead inferred from patterns of genetic relatedness among nests. Transactions of the American Fisheries Society, 134:1202-1212.
McComas, R. L., D. A. Frost, S. G. Smith, J. W. Ferguson, T. J. Carlson, T. Aboellail. 2005. A study to estimate salmonid survival through the Columbia River estuary using acoustic tags, 2002. Contract by Fish Ecology Division, Northwest Fisheries Science Center, National Marine Fisheries Service, National Oceanic and Atmospheric Administration to the U.S. Army Corps of Engineers. Portland District, Seattle, Contract E86910060, 84 p.
Mobrand, L., J. Barr, L. Blankenship, D. Campton, T. Evelyn, T. Flagg, C. Mahnken, L. Seeb, P. Seidel, and W. Smoker. 2005. Hatchery Reform in Washington State: Principles and Emerging Issues. Fisheries 30(6):11-23.
Riley, S., C. P. Tatara, J. A. Scheurer. 2005. Aggression and feeding of hatchery-reared and naturally reared steelhead (Oncorhynchus mykiss) fry in a laboratory flume and a comparison with observations in natural streams. Canadian Journal of Fisheries and Aquatic Sciences, 62:1400-1409.
Top of Page
2004
Beamish, R. J., C. V. Mahnken, C. M. Neville. 2004. Evidence that reduced early marine growth is associated with lower marine survival of Coho salmon. Transactions of the American Fisheries Society, 133:26-33.
Beckman, B. R., W. T. Fairgrieve, K. A. Cooper, C. V. Mahnken, R. J. Beamish. 2004. Evaluation of endocrine indices of growth in individual postsmolt coho salmon. Transactions of the American Fisheries Society, 133:1057-1067.
Berejikian, B. A., J. A. Scheurer, J. Lee, D. M. Van Doornik, E. Volk, T. Johnson. 2004. Evaluation of conservation hatchery rearing and release strategies for steelhead recovery in the Hamma Hamma River. Annual Report to the Hatchery Scientific Review Group, IAC Grant #01-042, 33 p.
Berejikian, B.A., and M.J. Ford. 2004. Review of relative fitness of hatchery and natural salmon. U.S. Dept. of Commerce, NOAA Tech. Memo., NMFS-NWFSC-61, 28 p.
Fairgrieve, W. T., C. L. Masada, W. C. McAuley, M. E. Peterson, M. S. Myers, M. S. Strom. 2004. Use of antibiotics and new vaccines to reduce mortality from bacterial kidney disease in chinook salmon: evaluation of toxic effects of long-term prophylactic use of azithromycin and erythromycin. Final Report for FY 1999-2002. In Berejikian, B. A., C. E. Nash. (Eds.) Research On Captive Broodstock Programs For Pacific Salmon. Report to Bonneville Power Administration for FY02, Project No. 1993-056-00, Contract No. 99-AI-17859.
Hard, J.J., and K.A. Naish. 2004. Evaluate effects of inbreeding and inbreeding depression. In B.A. Berejikian (editor), Research on captive broodstock programs for Pacific salmon, 2003-2004 Annual report, Project No. 199305600, p.164-189. Available Bonneville Power Administration (BPA Report DOE/BP-00005227-4, 190 electronic pages), Environment Fish and Wildlife, P.O. Box 3621, Portland, OR 97208.
Mahnken, C. V., W. T. Fairgrieve, F. W. Waknitz, D. J. Maynard, H. L. Blankenship. 2004. Lessons for marine fish enhancement: experiences with Pacific salmon. Pages 91-105 in Stock Enhancement and Sea Ranching: Developments, Pitfalls and Opportunities. Blackwell, Oxford.
Rhodes, L. D., C. K. Rathbone, L. W. Harrell, R. K. Andrews, M. S. Strom. 2004. Use of antibiotics and new vaccines to reduce mortality from bacterial kidney disease in chinook salmon: study the efficacy of other vaccines. Final report for FY02-FY03. In Berejikian, B. A., C. E. Nash. (Eds.) Research On Captive Broodstock Programs For Pacific Salmon. Report to Bonneville Power Administration for FY02, Project No. 1993-056-00, Contract No. 99-AI-17859.
Riley, S., H. Fuss, L. L. LeClair. 2004. Ecological effects of hatchery-reared juvenile chinook and coho salmon on wild salmonids in two Washington streams. North American Journal of Fisheries Management, 24:506-517.
Top of Page
2003
Berejikian, B. A., W. T. Fairgrieve, P. Swanson, E. P. Tezak. 2003. Current velocity and injection of GnRHa affect reproductive behavior and body composition of captively reared offspring of wild chinook salmon (Oncorhynchus tshawytscha). Canadian Journal of Fisheries and Aquatic Sciences, 60:690-699.
Berejikian, B. A., J. A. Scheurer, J. Lee, D. M. Van Doornik, E. Volk, T. Johnson, R. Endicott. 2003. Evaluation of conservation hatchery rearing and release strategies for steelhead recovery in the Hamma Hamma River. Annual Report to the Hatchery Scientific Review Group, IAC Grant #01-042, 25 p.
Berejikian, B. A., E. P. Tezak, A. LaRae. 2003. Innate and enhanced predator recognition in hatchery-reared chinook salmon (Oncorhynchus tshawytscha). Environmental Biology of Fishes, 67:241-251.
Brooks, K. M., A. R. Stierns, C. V. Mahnken, D. B. Blackburn. 2003. Chemical and biological remediation of the benthos near Atlantic salmon farms. Aquaculture, 219:355-377.
Brooks, K. M., C. V. Mahnken. 2003. Interactions of Atlantic salmon in the Pacific Northwest environment: III. Accumulation of zinc and copper. Fisheries Research, 62:295-305.
Brooks, K. M., C. V. Mahnken. 2003. Interactions of Atlantic salmon in the Pacific northwest environment: II. Organic wastes. Fisheries Research, 62:255-293.
Fairgrieve, W. T., C. L. Masada, W. C. McAuley, M. E. Peterson, M. S. Meyers, M. S. Strom. 2003. Use of antibiotics and new vaccines to reduce mortality from bacterial kidney disease in chinook salmon: evaluation of toxic effects of long-term prophylactic use of azithromycin and erythromycin. Final Report for FY 1999-2002. In Berejikian, B. A., C. E. Nash. (Eds.) Research on captive broodstock programs for Pacific salmon Research, FY2002-2003. Annual Report to Bonneville Power Administration, Contract No. 99-AI-17859.
Hopkins, W. A., C. P. Tatara, H. A. Brant, C. H. Jagoe. 2003. Relationships between mercury body concentrations, standard metabolic rate, and body mass in eastern mosquitofish (Gambusia holbrooki) from three experimental populations. Environmental Toxicology and Chemistry, 22:586-590.
Maynard, D. J., B. A. Berejikian, T. A. Flagg, S. Riley. 2003. Development of a Natural Rearing System to Improve Supplemental Fish Quality. 1999-2003 Progress Report. Report to the Bonneville Power Administration, Project No. 1991-05500, 188 p. (BPA Report DOE/BP-00000548-1)
Rhodes, L. D., C. K. Rathbone, L. W. Harrell, R. K. Andrews, M. S. Strom. 2003. Use of antibiotics and new vaccines to reduce mortality from bacterial kidney disease in chinook salmon: study the efficacy of other vaccines. Final report for FY02-FY03. In Berejikian, B. A., C. E. Nash. (Eds.) Research on captive broodstock programs for Pacific salmon Research, FY2002-2003. Annual Report to Bonneville Power Administration, Contract No. 99-AI-17859.
Top of Page
2002
Berejikian, B. A., D. M. Van Doornik, E. Volk, T. Johnson, J. Lee, J. Atkins, R. Endicott. 2002. Evaluation of conservation hatchery rearing and release strategies for steelhead recovery in the Hamma Hamma River. Annual report to the Hatchery Scientific Review Group, IAC Grant #01-042, 25 p.
Brooks, K. M., C. E. Nash, C. V. Mahnken. 2002. Environmental effects associated with marine netpen waste with emphasis on salmon farming in the Pacific Northwest. Pages 159-203 in Stickney, R. R., J. P. McVey. (Eds.) Responsible Marine Aquaculture. CABI Publishing.
Campbell, B., B. R. Beckman, W. T. Fairgrieve, J. T. Dickey, P. Swanson. 2002. Effects of growth on age of maturation, fecundity, and egg size in female coho salmon: Final Report. In Berejikian, B. A. (Ed.) Research on Captive Broodstock Programs for pacific Salmon. Report to Bonneville Power Administration for FY 01. Contract No. 199305600.
Frost, D. A., W. C. McAuley, D. J. Maynard, T. A. Flagg. 2002. NMFS Northwest Fisheries Science Center, report to NMFS Office of Protected Resources for captive broodstock rearing of Redfish Lake sockeye. 24 p.
Frost, D. A., W. C. McAuley, D. J. Maynard, T. A. Flagg. 2002. Redfish Lake sockeye salmon captive broodstock rearing and research. Report to the Bonneville Power Administration, Contract DE-AI79-92BP41841, 22 p.
Hard, J. J. 2002. Inbreeding. Pages 96-110 in Berejikian, B. A. (Ed.) Research on captive broodstock technology for Pacific salmon. Annual Report to Bonneville Power Administration, Project No. 93-56 (Contract No. 00005227).
McAuley, W. C., W. T. Fairgrieve, D. A. Frost, T. A. Flagg. 2002. Growth, survival and reproductive performance of Lake Wenatachee sockeye salmon (Brood year 1991) reared in either freshwater or seawater. Page 24 in Swanson, P., C. E. Nash. (Eds.) Research on captive broodstock programs for Pacific Salmon Research. Annual Report to Bonneville Power Administration. Contract No. 00005227.
Shearer, K. D., P. Parkins, B. A. Gadberry, B. Campbell, J. T. Dickey, P. Swanson. 2002. Effects of growth rate/size on the incidence of early sexual maturation in male spring chinook salmon (Oncorhynchus tshawytscha): Final Report. In Berejikian, B. A. (Ed.) Research on Captive Broodstock Programs for pacific Salmon. Report to Bonneville Power Administration for FY 01. Contract No. 199305600.
Strom, M. S., L. D. Rhodes, S. C. Corbett, C. K. Rathbone, L. W. Harrell. 2002. Use of antibiotics and new vaccines to reduce mortality from bacterial kidney disease in chinook salmon: study the efficacy of other vaccines. Final report for FY01 and FY02. In Berejikian, B. A., C. E. Nash. (Eds.) Research On Captive Broodstock Programs For Pacific Salmon. Report to Bonneville Power Administration for FY01, Project No. 1993-056-00, Contract No. 00005227.
Swanson, P., B. Campbell, B. R. Beckman, D. A. Larsen, J. T. Dickey, K. A. Cooper, N. Hodges, P. Kline, K. D. Shearer, D. Venditti, G. A. Winans, G. Young. 2002. Monitoring reproductive development in captive broodstock and anadromous hatchery stocks of Snake River spring chinook salmon during the freshwater phase of adult migration: Progress Report. In Berejikian, B. A. (Ed.) Research on Captive Broodstock Programs for pacific Salmon. Report to Bonneville Power Administration for FY 01. Contract No. 199305600.
Tatara, C. P., M. Mulvey, M. C. Newman. 2002. Genetic and demographic responses of mercury-exposed mosquitofish (Gambusia holbrooki) populations: temporal stability and reproductive components of fitness. Environmental Toxicology and Chemistry, 21(10):2191-2197.
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2001
Berejikian, B. A., E. P. Tezak, S. Riley, A. LaRae. 2001. Competitive ability and social behavior of juvenile steelhead (Oncorhynchus mykiss) reared in enriched and conventional hatchery tanks and a stream environment. Journal of Fish Biology, 59:1600-1613.
Berejikian, B. A., D. M. Van Doornik, E. Volk, T. Johnson, B. Smith, R. Endicott. 2001. Evaluation of conservation hatchery rearing and release strategies for steelhead recovery in the Hamma Hamma River. Annual report to the Hatchery Scientific Review Group, IAC Grant #01-042, 21 p.
Berejikian, B. A., A. LaRae, E. P. Tezak. 2001. Factors affecting acquired predator recognitio and fright responses in hatchery-reared chinook salmon. In Development of a natural rearing system to improve supplemental fish quality, 1999-2000. Report to Bonneville Power Administration, Contract DE-A179-91BP20651.
Berejikian, B. A., E. P. Tezak, L. K. Park, E. LaHood, S. L. Schroder, E. Beall. 2001. Male competition and breeding success in captively reared and wild coho salmon (Oncorhynchus kisutch). Canadian Journal of Fisheries and Aquatic Sciences, 58:804-810.
Berejikian, B. A., E. P. Tezak, L. K. Park, S. L. Schroder, E. Beall, E. LaHood. 2001. Male dominance and spawning behavior of captively reared and wild coho salmon (Oncorhynchus kisutch). Canadian Journal of Fisheries and Aquatic Sciences, 58:804-810.
Berejikian, B. A. 2001. Release of captively-reared adult salmon for use in recovery. World Aquaculture, 32:63-65.
Berejikian, B. A., E. P. Tezak, S. L. Schroder. 2001. Reproductive behavior and breeding success of captively reared Chinook salmon. North American Journal of Fisheries Management, 21:255-260.
Berejikian, B. A., E. P. Tezak, S. Riley, A. LaRae. 2001. Social behavior and competitive ability of juvenile steelhead (Oncorhynchus mykiss) reared in enriched and conventional hatchery tanks and a stream environment. Journal of Fish Biology, 59:1600-1613.
Berejikian, B. A., E. P. Tezak, S. Riley, A. LaRae. 2001. Territorial behavior and relative competitive ability of juvenile steelhead (Oncorhynchus mykiss) reared in enriched and conventional hatchery tanks and a stream environment. In Development of a natural rearing system to improve supplemental fish quality, 1999-2000. Report to Bonneville Power Administration, Contract DE-A179-91BP20651.
Campbell, B., B. R. Beckman, W. T. Fairgrieve, J. T. Dickey, P. Swanson. 2001. Effects of growth on age of maturity, egg size, and fecundity in coho salmon: Progress Report. In Berejikian, B. A. (Ed.) Research On Captive Broodstock Programs For Pacific Salmon. Report to Bonneville Power Administration for FY00 , Contract No. 199305600.
Campbell, B., B. R. Beckman, W. T. Fairgrieve, J. T. Dickey, P. Swanson. 2001. Effects of growth on timing of maturation, fecundity, egg size and egg quality in coho salmon: Progress report. In Berejikian, B. A., K. A. Naish. (Eds.) Captive Broodstock Research, FY2000 Annual Report to Bonneville Power Administration, Contract No. 00005227.
Flagg, T. A., W. C. McCauley, D. A. Frost, M. Wastel, W. T. Fairgrieve, C. V. Mahnken. 2001. Redfish Lake sockeye salmon captive broodstock rearing and research, 1995-2000. Report to the Bonneville Power Administration, Contract 1992BP41841, 71 p.
Frost, D. A., W. C. McAuley, D. J. Maynard, T. A. Flagg. 2001. NMFS Northwest Fisheries Science Center report to NMFS Office of Protected Resources for captive broodstock rearing of Redfish Lake sockeye salmon from January through December 2000 under ESA Section 10 Propagation Permit 1148, 21.
Hard, J. J. 2001. Inbreeding. Pages 86-94 in Berejikian, B. A., C. E. Nash. (Eds.) Research on captive broodstock technology for Pacific salmon. Annual Report to Bonneville Power Administration, Project No. 93-56 (Contract No. 00005227).
Maynard, D. J., G. C. McDowell, G. A. Snell, A. LaRae, J. L. Hackett, T. A. Flagg, C. V. Mahnken. 2001. Coordinating the Integration of NATURES Variables into the Forks Creek Study. In Maynard, D. J., B. A. Berejikian, T. A. Flagg, C. V. Mahnken. (Eds.) Development of a natural rearing system to improve supplemental fish quality 1996-1998.
Maynard, D. J., G. C. McDowell, G. A. Snell, A. LaRae, J. L. Hackett, T. A. Flagg, C. V. Mahnken. 2001.  Coordinating the integration of natures variables into the Forks Creek study. Pages 60-79 in Maynard, D. J., B. A. Berejikian, T. A. Flagg, C. V. Mahnken. (Eds.) Development of a natural rearing system to improve supplemental fish quality 1996-1998. Report to Bonneville Power Administration. Contract DE-A179-91BP20651.
Maynard, D. J., B. A. Berejikian, T. A. Flagg, C. V. Mahnken. 2001. Development of a natural rearing system to improve supplemental fish quality. 1996-1998 final. Report to the Bonneville Power Administration, Contract 00004768, 175 p.
Maynard, D. J., G. C. McDowell, G. A. Snell, T. A. Flagg, C. V. Mahnken. 2001. Development of a raceway exercise system for fall chinook salmon. Pages 44-52 in Maynard, D. J., B. A. Berejikian, T. A. Flagg, C. V. Mahnken. (Eds.) Development of a natural rearing system to improve supplemental fish quality 1996-1998, Bonneville Power Administration, Contract DE-A179-91BP20651.
Maynard, D. J., J. L. Hackett, M. Wastel, A. LaRae, G. C. McDowell, T. A. Flagg, C. V. Mahnken. 2001. Effect of Automated subsurface feeders on behavior and predator vulnerability of fall chinook salmon. Pages 6-19 in Maynard, D. J., e. al. (Eds.) Development of a natural rearing system to improve supplemental fish quality 1996-1998, Report to the Bonneville Power Administration, DE-A179-91BP20651.
Maynard, D. J., G. C. McDowell, G. A. Snell, A. LaRae, T. A. Flagg, C. V. Mahnken. 2001. Effect of live food diets on the foraging behavior of cultured fall Chinook Salmon. Pages 20-34 in Maynard, D. J., e. al. (Eds.) Development of a natural rearing system to improve supplemental fish quality 1996-1998, Report to the Bonneville Power Administration, DE-A179-91BP20651.
Maynard, D. J., A. LaRae, G. C. McDowell, T. A. Flagg, C. V. Mahnken. 2001. Effect of predator avoidance training on the postrelease survival of fall chinook salmon. Pages 53-59 in Maynard, D. J., e. al. (Eds.) Development of a natural rearing system to improve supplemental fish quality 1996-1998, Report to the Bonneville Power Administration, DE-A179-91BP20651.
Maynard, D. J., G. E. Vander Haegen, J. Colt, G. C. McDowell, T. A. Flagg. 2001. Increase Postrelease survival by rearing coho salmon with NATURES seminatural raceway habitat. Report to the Hatchery Scientific Review Group, Contract 01-040, 35 p.
Maynard, D. J., T. A. Flagg. 2001. NATURES rearing as a tool for increasing ranched salmon survival. World Aquaculture, 32(2):56-58.
Nash, C. E., K. M. Brooks, W. T. Fairgrieve, R. N. Iwamoto, C. V. Mahnken, M. B. Rust, M. S. Strom, F. W. Waknitz. 2001. The net-pen salmon farming industry in the Pacific Northwest. U.S. Dept. of Commerce, NOAA Tech. Memo., NMFS-NWFSC-49, 125 p. (PDF | HTML)
Riley, S., P. M. Kiffney, C. Inman. 2001. Habitat inventory and salmonid stock assessment in the Cedar River and tributaries. Report to Seattle Public Utilities Technical Report.
Shearer, K. D., B. Campbell, J. T. Dickey, B. A. Gadberry, P. Parkins, P. Swanson. 2001. Effects of growth rate on early male maturation and adult quality on spring Chinook salmon: Progress report. In Berejikian, B. A., K. A. Naish. (Eds.) Captive Broodstock Research, FY2000 Annual Report to Bonneville Power Administration, Contract No. 00005227.
Strom, M. S., L. W. Harrell, W. T. Fairgrieve, M. E. Peterson, C. K. Rathbone, L. D. Rhodes. 2001. Use of antibiotics and new vaccines to reduce mortality from Bacterial Kidney Disease in chinook salmon. Final report for FY00-FY01. In Berejikian, B. A., C. E. Nash. (Eds.) Research On Captive Broodstock Programs For Pacific Salmon. Report to Bonneville Power Administration for FY01, Project No. 1993-056-00, Contract No. 99-AI-17859.
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2000
Berejikian, B. A., E. P. Tezak, A. LaRae. 2000. Female mate choice and spawning behavior of chinook salmon (Oncorhynchus tshawytscha) under experimental conditions. Journal of Fish Biology, 57:647-661.
Berejikian, B. A. (Ed.) 2000. Research on captive broodstock programs for pacific salmon: performance period 1 June 1999 through 31 May 2000. Report to the Bonneville Power Administration, Contract 99-AI-17859, 114 p.
Berejikian, B. A., E. P. Tezak, T. A. Flagg, A. LaRae, E. Kummerow, C. V. Mahnken. 2000. Social dominance, growth and habitat use of age-0 steelhead grown in enriched and conventional hatchery rearing environments. Canadian Journal of Fisheries and Aquatic Sciences, 57:628-636.
Berejikian, B. A., E. P. Tezak, S. L. Schroder, C. M. Knudsen. 2000. The effects of modified rearing environments on the vulnerability of chinook salmon (Oncorhynchus tshawytscha) juveniles to natural predators. Pages 36-45 in Development of a natural rearing system to improve supplemental fish quality, 1996-1998. Report to Bonneville Power Administration, Contract DE-A179-91BP20651.
Flagg, T. A., C. V. Mahnken. 2000. Captive broodstocking to aid recovery of endangered species. In Stickney, R. R., W. Griffin, R. W. Hardy, S. Johnson, P. Lee, M. B. Rust, G. Treece, G. W. Wedemeyer. (Eds.) The Encyclopedia of Aquaculture. John Wiley & Sons, New York, NY.
Flagg, T. A., T. E. Ruehle. (Eds.) 2000. Cle Elum Lake salmon restoration feasibility study: summary of research. Final Report to the Bonneville Power Administration, Contract 86-BP64840, 110 p.
Flagg, T. A., D. J. Maynard, C. V. Mahnken. 2000. Conservation hatcheries. Pages 174-177 in Stickney, R. R., W. Griffin, R. W. Hardy, S. Johnson, P. Lee, M. B. Rust, G. Treece, G. W. Wedemeyer. (Eds.) The Encyclopedia of Aquaculture. John Wiley & Sons, New York, NY.
Flagg, T. A., B. A. Berejikian, J. Colt, W. W. Dickhoff, L. W. Harrell, D. J. Maynard, C. E. Nash, M. S. Strom, R. N. Iwamoto, C. V. Mahnken. 2000. Ecological and behavioral impacts of artificial production strategies on the abundance of wild salmon populations. U.S. Dept. of Commerce, NOAA Tech. Memo., NMFS-NWFSC-41, 92 p. (PDF | HTML)
Flagg, T. A., C. V. Mahnken. 2000. Endangered species recovery: Captive broodstocks to aid recovery of endangered salmon stocks. Pages 290-292 in Stickney, R. R., W. Griffin, R. W. Hardy, S. Johnson, P. Lee, M. B. Rust, G. Treece, G. W. Wedemeyer. (Eds.) Encyclopedia of Aquaculture. John Wiley & Sons.
Hard, J. J., B. A. Berejikian, E. P. Tezak, S. L. Schroder, C. M. Knudsen, L. T. Parker. 2000. Evidence for morphometric differentiation of wild and captively reared adult coho salmon (Oncorhynchus kisutch Walbaum): a geometric analysis. Environmental Biology of Fishes, 58:61-73.
Hard, J. J. 2000. Inbreeding. In Berejikian, B. A. (Ed.) Research on captive broodstock programs for Pacific salmon. Report to Bonneville Power Administration, Contract No. 1999A117859, Proj. No. 199305600 (BPA Report DOE/BP-17859-1), June 2000.
McAuley, W. C., M. Wastel, T. A. Flagg. 2000. Manchester spring chinook broodstock project Progress Report, 2000. Report to the Funded by Division of Fish and Wildlife Bonneville Power Administration, 10 p.
McAuley, W. C., M. Wastel, T. A. Flagg. 2000. Manchester spring chinook broodstock project, Progress Report for 1998-1999. Report to the Bonneville Power Administration, Contract 96-BI 96441, 8 p.
Nash, C. E., R. N. Iwamoto, C. V. Mahnken. 2000. Aquaculture risk management and marine mammal interactions in the Pacific Northwest. Aquaculture, 183:307-323.
Scholz, N. L., N. Truelove, B. L. French, B. A. Berejikian, T. P. Quinn, E. Casillas, T. K. Collier. 2000. Diazinon disrupts antipredator and homing behaviors in chinook salmon (Oncorhynchus tshawytscha). Canadian Journal of Fisheries and Aquatic Sciences, 57:1911-1918.
Shearer, K. D., J. T. Silverstein, W. W. Dickhoff, E. M. Plisetskaya. 2000. The roles of growth and fatness in the early sexual development of male 1+ age spring chinook salmon (Oncorhynchus tshawytscha). In Berejikian, B. A. (Ed.) Research on Captive Broodstock Technology for Pacific Salmon. Annual Report, 1996. U. S. Department of Energy, BPA. Project Number 93-056. Contract Number DE-A179-93BP55064.
Strom, M. S., W. T. Fairgrieve, L. W. Harrell, C. K. Rathbone. 2000. Efficacy; toxicity of treatments for Bacterial Kidney Disease in chinook salmon. Pages 105-110 in Berejikian, B. A. (Ed.) Research on captive broodstock programs for Pacific salmon Research, FY2000 Annual Report to Bonneville Power Administration, Contract No. 99-AI-17859.
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1999
Beckman, B. R., W. W. Dickhoff, W. S. Zaugg, C. Sharpe, S. Hirtzel, R. Schrock, D. A. Larsen, D. Ewing, A. Plamisano, C. B. Schreck, C. V. Mahnken. 1999. Growth, smoltification, and smolt-to-adult return of spring chinook salmon (Oncorhynchus tshawytshcha) from hatcheries on the Deschutes River, Oregon. Transactions of the American Fisheries Society, 128:1125-1150.
Berejikian, B. A., R. J. Smith, E. P. Tezak, S. L. Schroder, C. M. Knudsen. 1999. Chemical alarm signals and complex hatchery rearing habitats affect anti-predator behavior and survival of chinook salmon (Oncorhynchus tshawytscha) juveniles. Canadian Journal of Fisheries and Aquatic Sciences, 56:830-838.
Berejikian, B. A., E. P. Tezak, S. L. Schroder, T. A. Flagg, C. M. Knudsen. 1999. Competitive differences between newly emerged offspring of captively reared and wild coho salmon (Oncorhynchus kisutch). Transactions of the American Fisheries Society, 128:832-839.
Bult, T. P., S. Riley, R. L. Haedrich, R. J. Gibson, J. Heggenes. 1999. Density-dependent habitat selection by juvenile Atlantic salmon (Salmo salar L. ) in experimental riverine habitats. Canadian Journal of Fisheries and Aquatic Sciences, 56:1298-1306.
Flagg, T. A., C. E. Nash. (Eds.) 1999. A conceptual framework for conservation hatchery strategies for Pacific salmonids. U.S. Dept. of Commerce, NOAA Tech. Memo., NMFS-NWFSC-38, 48 p. (PDF | HTML)
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1998
Latterell, J. J., K. D. Fausch, C. Gowan, S. Riley. 1998. Relationship of trout recruitment to snowmelt runoff flows and adult trout abundance in six Colorado mountain streams. Rivers, 6:240-250.
Mahnken, C. V., G. Ruggerone, F. W. Waknitz, T. A. Flagg. 1998. A historical perspective on salmonid production from Pacific Rim hatcheries. North Pacific Anadromous Fish Commission Bulletin, 1:38?53.
Maynard, D. J., T. A. Flagg, C. V. Mahnken, S. L. Schroder. 1998. Natural rearing enhancement system technology for salmon culture. Pages 45-50 in Brannon, E. L., W. C. Kinsel. (Eds.) Proceedings of the Columbia River Anadromous Salmonid Rehabilitation and Passage Symposium. Aquaculture Research Institute, University of Idaho, Moscow.
Maynard, D. J., A. LaRae, G. C. McDowell, G. A. Snell, T. A. Flagg, C. V. Mahnken. 1998. Predator avoidance training can increase post-release survival of chinook salmon. Pages 59-62 in Smith, R. Z. (Ed.) Proceedings of the 48th Annual Pacific Northwest Fish Culture Conference, Gleneden Beach, OR, December 1997.
Maynard, D. J., E. P. Tezak, M. Crewson, D. A. Frost, T. A. Flagg, S. L. Schroder, C. Johnson, C. V. Mahnken. 1998. Seminatural raceway habitat increases chinook salmon post-release survival. Pages 81-91 in Smith, R. Z. (Ed.) Proceedings of the 48th Annual Pacific Northwest Fish Culture Conference, Gleneden Beach, OR, December 1997.
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1997
Berejikian, B. A., E. P. Tezak, S. L. Schroder, C. M. Knudsen, J. J. Hard. 1997. Reproductive behavioral interactions between wild and captively reared coho salmon (Oncorhynchus kisutch). ICES Journal of Marine Science, 54:1040-1050.
Kocovsky, P. M., C. Gowan, K. D. Fausch, S. Riley. 1997. Spinal injury rates in three wild trout populations in Colorado after eight years of backpack electrofishing. North American Journal of Fisheries Management, 17:308-313.
Schiewe, M. H., T. A. Flagg, B. A. Berejikian. 1997. The use of captive broodstocks for gene conservation of salmon in the Western United States. Bull. Nat. Res. Inst. Aquacult. Suppl, Suppl. 3:29-34.
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1996
Berejikian, B. A., S. B. Mathews, T. P. Quinn. 1996. Effects of hatchery and wild ancestry and rearing environments on the development of agonistic behavior in steelhead trout fry (Oncorhynchus mykiss) fry. Canadian Journal of Fisheries and Aquatic Sciences, 53:2004-2014.
Berejikian, B. A., D. J. Maynard, T. A. Flagg, C. V. Mahnken. 1996. Instream postrelease growth and survival of chinook salmon smolts subjected to predator training and alternate feeding strategies. Pages 113-127 in Development of a natural rearing system to improve supplemental fish quality, 1991-1995. Report to Bonneville Power Administration, Contract DE-A179-91BP20651.
Flagg, T. A., D. J. Maynard, C. V. Mahnken. (Eds.) 1996. Development of a natural rearing system to improve supplemental fish quality, 1991-1995. Report to the Bonneville Power Administration, Contract DE-AI79-91BP20651, 231 p.
Flagg, T. A., W. C. McAuley, M. Wastel, D. A. Frost, C. V. Mahnken. 1996. Redfish Lake sockeye salmon captive broodstock rearing and research, 1994. Report to the Bonneville Power Administration, Contract DE-AI79- 92BP41841, 71 p. plus appendices.
Maynard, D. J., T. A. Flagg, B. A. Berejikian. 1996. A comparison of hatchery and wild salmonid biology. Pages 13-26 in Maynard, D. J., T. A. Flagg, C. V. Mahnken. (Eds.) Development of a natural rearing system to improve supplemental fish quality, 1991-1995. Report to Bonneville Power Administration, Contract DE-A179-91BP20651.
Maynard, D. J., T. A. Flagg, C. V. Mahnken. 1996. A general experimental plan for evaluating culture techniques for increasing supplemental fish quality and postrelease survival. Pages 1-12 in Maynard, D. J., T. A. Flagg, C. V. Mahnken. (Eds.) Development of a Natural Rearing System to improve supplemental fish quality, 1991-1995. Report to Bonneville Power Administration. Contract DE-A179-91BP20651.
Maynard, D. J., T. A. Flagg, C. V. Mahnken. 1996. A review of seminatural culture techniques for increasing the postrelease survival of hatchery salmonids. Pages 26-40 in Maynard, D. J., T. A. Flagg, C. V. Mahnken. (Eds.) Development of a Natural Rearing System to improve supplemental fish quality, 1991-1995. Report to Bonneville Power Administration. Contract DE-A179-91BP20651.
Maynard, D. J., G. C. McDowell, E. P. Tezak, T. A. Flagg. 1996. Effect of diets supplemented with live food on the foraging behavior of cultured fall chinook salmon. Progressive Fish-Culturist, 58:187-191.
Maynard, D. J., T. A. Flagg, C. V. Mahnken, S. L. Schroder. 1996. Natural rearing technologies for increasing postrelease survival of hatchery-reared salmon. Bulletin of National Research Institute of Aquaculture, Suppl. 2:71-77.
Maynard, D. J., M. S. Kellet, D. A. Frost, E. P. Tezak, W. C. McAuley, T. A. Flagg, C. V. Mahnken. 1996. The behavior and postrelease survival of fall chinook salmon reared in conventional and seminatural raceways, 1992. Pages 52-65 in Maynard, D. J., T. A. Flagg, C. V. Mahnken. (Eds.) Development of a Natural Rearing System to improve supplemental fish quality, 1991-1995. Report to Bonneville Power Administration. Contract DE-A179-91BP20651.
Maynard, D. J., E. P. Tezak, B. A. Berejikian, T. A. Flagg. 1996. The effect of feeding spring chinook salmon a live food supplemented diet during acclimation, 1995. Pages 98-112 in Maynard, D. J., T. A. Flagg, C. V. Mahnken. (Eds.) Development of a natural rearing system to improve supplemental fish quality, 1991-1995. Report to Bonneville Power Administration, Contract DE-A179-91BP20651.
Maynard, D. J., G. C. McDowell, E. P. Tezak, T. A. Flagg. 1996. The effectiveness of live food supplementation in improving the foraging ability of fall chinook salmon, 1992. Pages 41-52 in Maynard, D. J., T. A. Flagg, C. V. Mahnken. (Eds.) Development of a Natural Rearing System to improve supplemental fish quality, 1991-1995. Report to Bonneville Power Administration. Contract DE-A179-91BP20651.
Maynard, D. J., M. Crewson, E. P. Tezak, W. C. McAuley, S. L. Schroder, C. M. Knudsen, T. A. Flagg, C. V. Mahnken. 1996. The postrelease survival of Satsop River fall chinook salmon reared in conventional and seminatural raceway habitats, 1994. Pages 78-97 in Maynard, D. J., T. A. Flagg, C. V. Mahnken. (Eds.) Development of a Natural Rearing System to improve supplemental fish quality, 1991-1995. Report to Bonneville Power Administration. Contract DE-A179-91BP20651.
Maynard, D. J., M. Crewson, E. P. Tezak, W. C. McAuley, T. A. Flagg. 1996. The postrelease survival of Yakima River spring chinook salmon acclimated in Conventional and Seminatural Raceways, 1994. Pages 66-77 in Maynard, D. J., T. A. Flagg, C. V. Mahnken. (Eds.) Development of a Natural Rearing System to improve supplemental fish quality, 1991-1995. Report to Bonneville Power Administration. Contract DE-A179-91BP20651.
Maynard, D. J., D. A. Frost, F. W. Waknitz, E. F. Prentice. 1996. Vulnerability of marked age-0 steelhead to a visual predator. Transactions of the American Fisheries Society, 125:330-333.
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1995
Berejikian, B. A., E. P. Tezak, L. K. Park, S. L. Schroder, C. M. Knudsen, J. J. Hard. 1995. Reproductive success of captively reared and wild coho salmon (Oncorhynchus kisutch). In Swanson, P. (Ed.) Captive broodstock evaluation. Report to Bonneville Power Administration, Contract DE-AI79-93BP55064.
Dickhoff, W. W., B. R. Beckman, D. A. Larsen, C. V. Mahnken, C. B. Schreck, C. Sharpe, W. S. Zaugg. 1995. Quality assessment of hatchery-reared spring chinook salmon smolts in the Columbia River Basin. Pages 292-302 in Schramm, H. L. Jr., R. G. Piper. (Eds.) Uses and Effects of Cultured Fishes in Aquatic Ecosystems. American Fisheries Society, Bethesda, Maryland.
Fausch, K. D., C. Gowan, A. Richmond, S. Riley. 1995. The role of dispersal in trout population response to habitat formed by large woody debris in Colorado mountain streams. Bulletin Francais de la Peche et de Pisciculture, 337/338/339:179-190.
Flagg, T. A., C. V. Mahnken. 1995. An assessment of the status of captive broodstock technology for Pacific salmon. Final Report to the Bonneville Power Administration, Environment, Fish and Wildlife, Contract DE-AI79-93BP55064, Project No. 93-56, 285 p.
Flagg, T. A., C. V. Mahnken, K. Johnson. 1995. Captive broodstocks for recovery of Snake River sockeye salmon. American Fisheries Society Symposium, 15:81-90.
Flagg, T. A., F. W. Waknitz, D. J. Maynard, G. B. Milner, C. V. Mahnken. 1995. Impact of hatcheries on native coho salmon populations in the lower Columbia River. American Fisheries Society Symposium, 15:366-375.
Flagg, T. A., F. W. Waknitz, D. J. Maynard, G. B. Milner, C. V. Mahnken. 1995. The effect of hatcheries on native coho salmon populations in the lower Columbia River. Pages 366-375 in Schramm, H. L. Jr., R. G. Piper. (Eds.) Uses and effects of cultured fishes in aquatic ecosystems. American Fisheries Society, Bethesda, MD.
Maynard, D. J., T. A. Flagg, C. V. Mahnken. 1995. A review of innovative culture strategies for enhancing the post-release survival of anadromous salmonids. American Fisheries Society Symposium, 15:307-314.
Maynard, D. J., T. A. Flagg, C. V. Mahnken. 1995. A review of semi-natural culture strategies for enhancing the postrelease survival of anadromous salmonids. American Fisheries Society Symposium, 15:307-314.
Riley, S., K. D. Fausch. 1995. Trout population response to habitat enhancement in six northern Colorado streams. Canadian Journal of Fisheries and Aquatic Sciences, 52:34-53.
Swanson, P. 1995. Environmental and endocrine control of reproduction in cultured salmonids. Pages 3-1 to 3-66 in Flagg, T. A., C. V. Mahnken. (Eds.) An assessment of captive broodstock technology for Pacific salmon. Report to Bonneville Power Administration, Contract DE-AI79 93BP55064, 285 p.
Swanson, P., T. A. Flagg, J. J. Hard, L. W. Harrell, K. D. Shearer, R. J. Pascho, W. K. Hershberger, K. C. Massee, R. W. Hardy. 1995. Research on Captive Broodstock Technology for Pacific Salmon, Annual Report 1995. Report to the Bonneville Power Administration, Contract 1993BP55064, Project No. 199305600, 220 p. (BPA Report DOE/BP-55064-2)
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1994
Flagg, T. A. 1994. Marine Fish Enhancement: Concepts and concerns for artificial propagation. Page 26 in Nosho, T., K. Freeman. (Eds.) Marine fish culture and enhancement. Proceedings of the marine fish culture and enhancement conference, Univ. Washington Sea Grant Pub. WSG-WO 94-1.
Flagg, T. A., K. Johnson, J. C. Gislason. 1994. Redfish Lake sockeye salmon broodstock programs. In Proceedings of the 1993 Alaska Department of Fish and Game Sockeye Culture Workshop, Cooper Landing, AK. 10 p.
Gowan, C., M. K. Young, K. D. Fausch, S. Riley. 1994. Restricted movement in stream salmonids: a paradigm lost? Canadian Journal of Fisheries and Aquatic Sciences, 51:2626-2637.
Iwamoto, R. N., W. D. Muir, B. P. Sandford, K. W. McIntyre, D. A. Frost, J. G. Williams, S. G. Smith, J. R. Skalski. 1994. Survival estimates for the passage of juvenile chinook salmon through Snake River dams and reservoirs. Report to the Bonneville Power Administration, Contract DE-AI79-93BP10891, 140 p.
Prentice, E. F., D. J. Maynard, S. L. Downing, D. A. Frost, M. S. Kellett, D. A. Bruland, P. Sparks-Mcconkey, F. W. Waknitz, R. N. Iwamoto, K. W. McIntyre, N. N. Paasch. 1994. A study to determine the biological feasibility of a new fish tagging system (1990-93). Report to the Bonneville Power Administration, Contract DE-AI79-84BP11982, 250 p.
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1993
Johnson, O. W., D. J. Maynard, G. B. Milner, F. W. Waknitz. 1993. Genetic considerations in the status review of lower Columbia River coho salmon. Pages 161-181 in Coho Salmon Workshop. Coast Bastion Inn, Nanamio, British Columbia.
Prentice, E. F., D. J. Maynard, P. Sparks-Mcconkey, C. S. McCutcheon, D. Neff, W. Steffens, F. W. Waknitz, A. L. Jensen, L. C. Stuehrenberg, S. L. Downing, B. P. Sandford, T. W. Newcomb. 1993. A study to determine the biological feasibility of a new fish tagging system. Report to the Bonneville Power Administration, Contract DE-AI79-84BP11982, 182 p.
Riley, S., R. L. Haedrich, R. J. Gibson. 1993. Negative bias of removal estimates of Atlantic salmon parr abundance in relation to stream size. Journal of Freshwater Ecology, 8:97-101.
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1992
Riley, S., K. D. Fausch, C. Gowan. 1992. Movement of brook trout (Salvelinus fontinalis) in four small subalpine streams in northern Colorado. Ecology of Freshwater Fish, 1:112-122.
Riley, S., K. D. Fausch. 1992. Underestimation of trout population size by maximum likelihood removal estimates in small streams. North American Journal of Fisheries Management, 12:768-776.
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1991
Bestgen, K. R., K. D. Fausch, S. Riley. 1991. Rediscovery of a relict southern population of Lake Chub, Couesius plumbeus, in Colorado. Southwestern Naturalist, 36:125-127.
Johnson, O. W., T. A. Flagg, D. J. Maynard, G. B. Milner, F. W. Waknitz. 1991. Status review for lower Columbia River coho salmon. U.S. Dept. of Commerce, NOAA Tech. Memo., NMFS-F/NWC-202, 94 p. (Complete Article (PDF) | Summary (HTML))
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1990
Flagg, T. A., L. W. Harrell, T. E. Ruehle, J. L. Mighell. 1990. Results of the Yakima Sockeye Project, 1989-1990. Page 2 in Proceedings of the 1990 Alaska Department of Fish and Game Sockeye Culture Workshop, Anchorage, AK.
Flagg, T. A., L. W. Harrell. 1990. Use of water-to-water transfers to maximize survival of salmonids stocked directly into seawater. Progressive Fish-Culturist, 52:127-129.
Prentice, E. F., T. A. Flagg, C. S. McCutcheon, D. F. Brastow, D. C. Cross. 1990. Equipment, methods, and automated data entry station for PIT tagging. American Fisheries Society Symposium, 7:335-340.
Prentice, E. F., T. A. Flagg, C. S. McCutcheon. 1990. Feasibility of using implantable passive integrated transponder (PIT) tags in salmonids. American Fisheries Society Symposium, 7:317-322.
Prentice, E. F., T. A. Flagg, C. S. McCutcheon. 1990. PIT tag monitoring systems for hydroelectric dams and fish hatcheries. American Fisheries Society Symposium, 7:323-334.
Waples, R. S., G. A. Winans, F. Utter, C. V. Mahnken. 1990. Genetic approaches to the management of Pacific salmon. Fisheries, (15)19-25.
Waples, R. S., G. A. Winans, F. Utter, C. V. Mahnken. 1990. Genetic monitoring of Pacific salmon hatcheries. U.S. Dept. of Commerce, NOAA Tech. Memo., Rept NMFS 92.
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1989
Dickhoff, W. W., C. V. Mahnken, F. W. Waknitz, W. S. Zaugg, M. G. Bernard, C. V. Sullivan. 1989. Effect of temperature and feeding on smolting and seawater survival of Atlantic salmon (Salmo salar). Aquaculture, 82:93-102.
Flagg, T. A., L. W. Harrell. 1989. Net-pen isolation of prespawning sockeye salmon-- a promising method to avoid IHN. Page 1 in Proceedings of the 1989 American Fisheries Society, North Pacific International Chapter annual meeting, New Westminster, BC.
Riley, S., G. Power, P. E. Ihssen. 1989. Meristic and morphometric variation in parr of Ouananiche and anadromous Atlantic salmon from rivers along the North Shore of the Gulf of St. Lawrence. Transactions of the American Fisheries Society, 118:515-522.
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1988
Adams, N. J., D. R. Barton, R. A. Cunjak, G. Power, S. Riley. 1988. Diel patterns of activity and substrate preference in young Arctic char of the Koroc River, northern Quebec. Canadian Journal of Zoology, 66:2500-2502.
Flagg, T. A., E. F. Prentice. 1988. Status of the PIT tag system. Page 6 in Proceedings of the 38th Annual Fish Culture Conference, Tacoma, WA, 1987.
Flagg, T. A., E. F. Prentice. 1988. The PIT tag system and its suitability in sockeye salmon. Page 6 in Proceedings of the 1988 Alaska Department of Fish and Game Sockeye Culture Workshop, Ketchikan, AK.
Flagg, T. A., E. F. Prentice. 1988. Use of the PIT tag in fish migration studies. Page 1 in Proceedings of the 50th Annual Pacific Fisheries Biologists Meeting, Ocean Shores, WA.
Flagg, T. A., J. L. Mighell. 1988. Yakima Basin sockeye salmon restoration feasibility study--fish culture program. Page 8 in Proceedings of the 1988 Alaska Department of Fish and Game Sockeye Culture Workshop, Ketchikan, AK.
Harrell, L. W., T. A. Flagg. 1988. Yakima Basin sockeye salmon restoration feasibility study--IHN certification. Page 6 in Proceedings of the 1988 Alaska Department of Fish and Game Sockeye Culture Workshop, Ketchikan, AK.
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1987
Maynard, D. J. 1987. Status signaling and the social structure of juvenile coho salmon. Ph. D. dissertation Univ. of Washington, Seattle, 212 p.
Riley, S., G. Power. 1987. Age at maturity in landlocked and anadromous Atlantic salmon parr from two Quebec Rivers. Environmental Biology of Fishes, 19:223-228.
Smith, S. D., R. W. Gould, W. S. Zaugg, L. W. Harrell, C. V. Mahnken. 1987. Safe prerelease disease treatment with formalin for fall chinook salmon smolts. Progressive Fish-Culturist, 49:96-99.
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1986
Riley, S. 1986. To sea or not to sea: how different are landlocked and anadromous salmon? Atlantic Salmon Journal, Sept. 1986.
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1985
Novotny, A. J., J. L. Mighell, T. A. Flagg. 1985. Low-flow isolation system for salmonid egg incubation. Pages 8-13 in Proceedings of the 35th Annual Northwest Fish Culture Conference, Kennewick, WA, 1984.
Sullivan, C. V., W. W. Dickhoff, C. V. Mahnken, W. K. Hershberger. 1985. Changes in the hemoglobin system of the coho salmon, Oncorhynchus kisutch, during smoltification and triiodothyronine and propylthiouracil treatment. Comparative Biochemistry and Physiology, 81A:807-813.
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1984
Harrell, L. W., T. A. Flagg, A. J. Novotny. 1984. Broodstock restoration programs at Manchester Marine Experimental Laboratory, Puget Sound, Washington. Pages 92-95 in Proceedings of the 34th Annual Fish Culture Conference, Moscow, ID, 1983.
Mahnken, C. V., W. W. Dickhoff, D. M. Damkaer. 1984. Comments on the mortality of coho salmon from saltwater release facilities in Oregon. Pages 19-23 in Pearcy, W. G. (Ed.) The Influence of Ocean Conditions on the Production of Salmonids in the North Pacific. Oregon State University Sea Grant College Program.
Riley, S., A. T. Bielak, G. Power. 1984. The Atlantic salmon stock of the Grand Watshishou River (Quebec): A historical perspective. Naturaliste Canadien, 111:219-228.
Sower, S. A., W. W. Dickhoff, T. A. Flagg, J. L. Mighell, C. V. Mahnken. 1984. Effects of estradiol and diethylstilbestrol on sex reversal and mortality in Atlantic salmon, Salmo salar. Aquaculture, 43:75-81.
Sower, S. S., W. W. Dickhoff, T. A. Flagg, J. L. Mighell, C. V. Mahnken. 1984. Dose-dependent effects of estradiol and diethystilbesterol on sex reversal and mortality in Atlantic salmon. Aquaculture, 43:75-81.
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1983
Dickhoff, W. W., C. V. Sullivan, C. V. Mahnken. 1983. Methods of measuring and controlling the parr to smolt transformation (smoltification) of juvenile salmon. Pages 5-9 in Sinderman, C. J. (Ed.) Proc. 11th Ann. U. S. -Japan Nat. Res. Symp. Tokyo, Japan, 1982. NOAA Tech. Report NMFS 27.
Flagg, T. A., E. F. Prentice, L. S. Smith. 1983. Swimming stamina and survival following direct seawater entry during parr-smolt transformation of coho salmon (Oncorhynchus kisutch). Aquaculture, 32:383-396.
Newcomb, T. W., T. A. Flagg. 1983. Some effects of Mount St. Helens volcanic ash on juvenile salmon smolts. Marine Fisheries Review, 45(2):8-12.
Newcomb, T. W., T. A. Flagg. 1983. Some effects of Mt. St. Helens volcanic ash on juvenile salmon smolts. Marine Fisheries Review, 45(2):8-12.
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1982
Dickhoff, W. W., L. C. Folmar, J. L. Mighell, C. V. Mahnken. 1982. Thyroid hormones during smoltification of yearling and underyearling coho salmon and yearling steelhead trout. Aquaculture, 28:39-48.
Flagg, T. A., L. S. Smith. 1982. Changes in swimming behavior and stamina during smolting of coho salmon. Pages 191-195 in Brannon, E. L., E. O. Salo. (Eds.) Salmon and Trout Migratory Behavior Symposium. Univ. Wash. Press.
Flagg, T. A. 1982. Swimming stamina and survival related to swimming fatigue in response to direct seawater entry during the parr-smolt transformation of coho salmon (Oncorhynchus kisutch). Am. Inst. Fish. Res. Biol. Briefs, 11(4):8.
Folmar, L. C., W. W. Dickhoff, C. V. Mahnken, F. W. Waknitz. 1982. Stunting and parr-reversion during smoltification of coho salmon (Oncorhynchus kisutch). Aquaculture, 28:91-104.
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1981
Dickhoff, W. W., T. A. Flagg, L. S. Smith. 1981. Interaction between thyroid hormones and swimming in coho salmon. Page 1 in Proc. Western Reg. Conf. Compar. Endocrin., Corvallis, OR.
Dickhoff, W. W., L. C. Folmar, J. L. Mighell, C. V. Mahnken, A. Gorbman. 1981. Thyroid hormones in smoltification of anadromous salmonids. Pages 217-226 in Proc. North Pacific Aquaculture Symp., Newport, Oregon, 1980.
Flagg, T. A. 1981. Swimming stamina and survival related to swimming fatigue in response to direct seawater entry during the parr-smolt transformation of coho salmon (Oncorhynchus kisutch). M.S. University of Washington, 58 p.
Maynard, D. J., D. D. Weber. 1981. Avoidance reactions of juvenile coho salmon (Oncorhynchus kisutch) to monocyclic aromatics. Canadian Journal of Fisheries and Aquatic Sciences, 38:772-778.
Weber, D. D., D. J. Maynard, W. D. Gronlund, V. Konchin. 1981. Avoidance reactions of migrating adult salmon to petroleum hydrocarbons. Canadian Journal of Fisheries and Aquatic Sciences, 38:779-781.
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1980
Maynard, D. J. 1980. Behavioral and sensory aspects of petrochemical pollution on Pacific salmon. M.S. thesis Univ. of Washington, Seattle, 175 p.
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