Journal Article

In press

Chattopadhyay, S., R. N. Paranjpye, D. E. Dykhuizen, E. V. Sokurenko, M. S. Strom. In press. Comparative evolutionary analysis of the major structural subunit of Vibrio vulnificus type IV pili. Molecular Biology and Evolution.

2009

Rhodes, L. D., S. Wallis, S. E. Demlow. 2009. Genes associated with an effective host response by Chinnok salmon to Renibacterium salmoninarum. Developmental and Comparative Immunology, 33(2):176-186.

Song, K., K. Boatright, J. Engebretson, W. B. Nilsson, M. S. Strom, J. Burns, W. Bevan. 2009. The use of polymerase chain reaction (PCR) for the detection and speciation of a bacterial bone and joint infection in children. Journal of Pediatric Orthopaedics, 29(2):182-188.

2008

Hom, T., T. K. Collier, M. M. Krahn, M. S. Strom, G. M. Ylitalo, W. B. Nilsson, R. N. Paranjpye, U. Varanasi. 2008. Assessing Seafood Safety in the Aftermath of Hurricane Katrina. American Fisheries Society Symposium, 64:73-93.

Paranjpye, R. N., M. E. Peterson, F. T. Poysky and M.W. Eklund. 2008. Incidence, Growth and Inactivation of Listeria monocytogenes in cooked and peeled cold-water shrimp. J. Aquat. Food Prod. Technol.17(3):266-284.

Rhodes, L. D., O. T. Nguyen, R. K. Deinhard, T. M. White, L. W. Harrell, M. C. Roberts. 2008. Characterization of Renibacterium salmoninarum with reduced susceptibility to macrolide antibiotics by a standardized antibiotic susceptibility test. Diseases of Aquatic Organisms, 80(3):173-180.

Stewart, J. R., R. J. Gast, R. S. Fujioka, H. M. Solo-Gabriele, J. S. Meschke, L. A. Amaral-Zettler, E. D. Castillo, M. F. Polz, T. K. Collier, M. S. Strom, C. Sinigalliano, P. D. Moeller, A. F. Holland. 2008. The coastal environment and human health: Microbial indicators, pathogens, sentinels and reservoirs. Environmental Health, 7(Suppl 2):S3.

Wiens, G. D., D. D. Rockey, Z. Wu, J. Chang, R. Levy, S. Crane, D. S. Chen, G. R. Capri, J. R. Burnett, P. S. Sudheesh, M. J. Schipma, H. Burd, A. Bhattacharyya, L. D. Rhodes, R. Kaul, M. S. Strom. 2008. The genome sequence of the fish pathogen Renibacterium salmoniarum suggests reductive evolution away from an environment Arthrobacter ancestor. Journal of Bacteriology, 190(21):6970-6982.

2007

Paranjpye, R. N., A. B. Johnson, A. E. Baxter, M. S. Strom. 2007. Role of type IV pilins of Vibrio vulnificus in persistence in oysters, Crassostrea virginica. Applied and Environmental Microbiology, 73(15):5041-5044.

Sudheesh, P. S., S. Crane, K. D. Cain, M. S. Strom. 2007. Sortase inhibitor phenyl vinyl sulfone inhibits Renibacterium salmoninarum adherence and invasion of host cells. Diseases of Aquatic Organisms, 78(2):115-127.

Vickery, M., W. B. Nilsson, M. S. Strom, J. L. Nordstrom, A. DePaola. 2007. A real-time PCR assay for the rapid determination of 16S rRNA Genotype and Discovery of 16S rRNA gene heterogeneity in individual Isolates of Vibrio vulnificus. Journal of Microbiological Methods, 68:376-384.

2006

Coady, A. M., A. L. Murray, D. G. Elliott, L. D. Rhodes. 2006. Both msa genes in Renibacterium salmoninarum are needed for full virulence in bacterial kidney disease. Applied and Environmental Microbiology, 72:2672-2678.

Fairgrieve, W. T., C. L. Masada, M. E. Peterson, W. C. McAuley, G. C. McDowell, M. S. Strom. 2006. Concentrations of erythromycin and azithromycin in mature Chinook salmon (Oncorhynchus tshawytscha) after intraperitoneal injection, and in their progeny. Diseases of Aquatic Organisms, 68:227-234.

Nilsson, W. B., N. Gudkovs, M. S. Strom. 2006. Atypical strains of Aeromonas salmonicida contain multiple copies of insertion element ISAs4 useful as a genetic marker and target for PCR Assay. Diseases of Aquatic Organisms, 70(3):209-217.

Rhodes, L.D., C. Durkin, S.L. Nance, and C.A. Rice. 2006. Prevalence and analysis of Renibacterium salmoninarum infection among juvenile Chinook salmon Oncorhynchus tshawytscha in North Puget Sound. Dis. Aquat. Organ. 71(3):179-190.

2005

Eklund, M. W., F. T. Poysky, G. A. Pelroy, M. E. Peterson. 2005. Distribution of Dungeness crab meat to retail stores and restaurants in hermetically sealed five pound cans and the risks of Clostridium botulinum toxin production. Journal of Aquatic Food Product Technology, 14(3):3-22.

Fairgrieve, W. T., C. L. Masada, W. C. McAuley, M. E. Peterson, M. S. Myers, M. S. Strom. 2005. Accumulation and clearance of orally administered erythromycin and its derivative, azithromycin, in juvenile fall Chinook salmon (Oncorhynchus tshawytscha). Diseases of Aquatic Organisms, 64:99-106.

Paranjpye, R. N., M. S. Strom. 2005. A Vibrio vulnificus Type IV pilin contributes to biofilm formation, adherence to epithelial cells and virulence. Infection and Immunity, 73:1411-1422.

2004

Eklund, M. W., F. T. Poysky, M. E. Peterson, R. N. Paranjpye, G. A. Pelroy. 2004. Competitive Inhibition between different Clostridium botulinum types and strains. Journal of Food Protection, 67(12):2682-2687.

Eklund, M. W., M. E. Peterson, F. T. Poysky, R. N. Paranjpye, G. A. Pelroy. 2004. Control of bacterial pathogens during processing of cold-smoked and dried salmon strips. Journal of Food Protection, 67:347-351.

Eklund, M. W., R. N. Paranjpye, G. A. Pelroy, M. E. Peterson, F. T. Poysky. 2004. Susceptibility of coho salmon, Oncorhynchus kisutch (Walbaum), to different toxins of Clostridium botulinum. Aquaculture Research, 35:594-600.

Paranjpye, R. N., M. E. Peterson, F. T. Poysky, G. A. Pelroy, M. W. Eklund. 2004. Control of bacterial pathogens by liquid smoke and sodium lactate during processing of cold-smoked and dried salmon strips. Journal of Aquatic Food Product Technology, 13(4):29-39.

Rhodes, L. D., C. K. Rathbone, S. C. Corbett, L. W. Harrell, M. S. Strom. 2004. Efficacy of cellular vaccines and genetic adjuvants against bacterial kidney disease in Chinook salmon (Oncorhynchus tshawytscha). Fish and Shellfish Immunology, 16(4):461-474. (Abstract: PubMed | Full Article: Fish & Shellfish Immunology)

Rhodes, L. D., A. M. Coady, R. K. Deinhard. 2004. Identification of a third msa gene in Renibacterium salmoninarum and the associated virulence phenotype. Applied and Environmental Microbiology, 70:6488-6494.

2003

Cook, M. A., M. B. Rust, K. C. Massee, T. J. Majack, M. E. Peterson. 2003. Uptake of erythromycin by first-feeding sockeye salmon, Oncorhynchus nerka (Walbaum), fed live or freeze-dried enriched adult Artemia or medicated pellets. Journal of Fish Diseases, 26:277-285.

Moore, M. M., M. S. Strom. 2003. Infection and mortality by the yeast Metschnikowia bicuspidata var. bicuspidata in chinook salmon fed live adult California brine shrimp (Artemia franciscana). Aquaculture, 220:43-57.

Nilsson, W. B., R. N. Paranjpye, A. DePaola, M. S. Strom. 2003. Sequence polymorphisms in the 16S rRNA gene of Vibrio vulnificus is a possible indicator of strain virulence. Journal of Clinical Microbiology, 41:442-446.

Paranjpye, R. N., F. T. Poysky, M. E. Peterson, G. A. Pelroy, M. W. Eklund. 2003. Incidence of Clostridium botulinum in whole pollock,fillets, mince and surimi. Journal of Aquatic Food Product Technology, 12:5-15.

Waknitz, F. W., R. N. Iwamoto, M. S. Strom. 2003. Interactions of Atlantic salmon in the Pacific Northwest: IV. Impacts on the local ecosystems. Fisheries Research, 62:307-328.

2002

Masada, C. L., S. E. LaPatra, A. W. Morton, M. S. Strom. 2002. An Aeromonas salmonicida type IV pilin is required for virulence in Rainbow trout (Oncorhynchus mykiss). Diseases of Aquatic Organisms, 51:13-25.

Nilsson, W. B., M. S. Strom. 2002. Detection and identification of bacterial pathogens of fish in kidney tissue using terminal restriction fragment length polymorphism (T-RFLP) analysis of 16S rRNA genes. Diseases of Aquatic Organisms, 48:175-185. (Abstract with link to PDF: DAO | Abstract: PubMed | Supporting file: T-RLFP Library for identification of fish pathogens)

Peterson, M. E., R. N. Paranjpye, F. T. Poysky, G. A. Pelroy, M. W. Eklund. 2002. Control of nonproteolytic Clostridium botulinum bypes B and E in crab analogs by combinations of heat pasteurization and water-phase salt. Journal of Food Protection, 65:130-139.

Rhodes, L. D., A. M. Coady, M. S. Strom. 2002. Expression of duplicate msa genes in the salmonid pathogen Renibacterium salmoninarum. Applied and Environmental Microbiology, 68:5480-5487. (Abstract and complete article: AEM | Abstract: PubMed)

2001

Rathbone, C. K., J. K. Babbitt, F. M. Dong, R. W. Hardy. 2001. Performance of juvenile coho salmon (Oncorhynchus kisutch) fed diets containing meals from fish wastes, deboned fish wastes, or skin-and-bone by-product as the protein ingredient. Journal of the World Aquaculture Society, 32(1):21-29.

Strom, M. S., R. N. Paranjpye. 2001. Characterization of components of type IV pili and type II extracellular secretion in Vibrio vulnificus and determination of their role in virulence. Bulletin of National Research Institute of Aquaculture, Supplement, 5:35-44.

2000

Hard, J. J., L. Connell, W. K. Hershberger, L. W. Harrell. 2000. Genetic variation in mortality of chinook salmon (Oncorhynchus tshawytscha) during a bloom of the marine alga Heterosigma akashiwo. Journal of Fish Biology, 56:1387-1397.

Kirov, S. M., T. C. Barnett, C. M. Pepe, M. S. Strom, M. J. Albert. 2000. Investigation of the role of the type IV Aeromonas pilus (Tap) in the pathogenesis of Aeromonas gastrointestinal infection. Infection and Immunity, 68:4040-4048. (Abstract and Complete Article: IAI | Abstract: PubMed | Complete article PDF)

Majack, T. J., M. B. Rust, K. C. Massee, G. W. Kissil, R. W. Hardy, M. E. Peterson. 2000. Bioencapsulation of erythromycin using adult brine shrimp, Artemia franciscana. Journal of Fish Diseases, 23:71-76.

Rhodes, L. D., T. H. Grayson, S. M. Alexander, M. S. Strom. 2000. Description and characterization of IS994, a putative IS3 family insertion sequence from the salmon pathogen, Renibacterium salmoninarum. Gene, 244:97-107.

Strom, M. S., R. N. Paranjpye. 2000. Epidemiology and pathogenesis of Vibrio vulnificus. Microbes and Infection, 2:177-188.

1999

O'Farrell, C. L., M. S. Strom. 1999. Differential expression of the virulence-associated protein p57 and characterization of its duplicated gene msa in virulent and attenuated strains of Renibacterium salmoninarum. Diseases of Aquatic Organisms, 38:115-123. (Abstract: DAO | Abstract: PubMed)

Van Beneden, R. J., L. D. Rhodes, G. R. Gardner. 1999. Potential alterations in gene expression associated with carcinogen exposure in Mya arenaria. Biomarkers, 4:485-491.

1998

Paranjpye, R. N., J. C. Lara, J. C. Pepe, C. M. Pepe, M. S. Strom. 1998. The Type IV Leader Peptidase/N-Methyltransferase of Vibrio vulnificus Controls Factors Required for Adherence to HEp-2 cells and Virulence in Iron-Overloaded Mice. Infection and Immunity, 66:5659-5668. (Abstract and complete article: IAI | Abstract: PubMed | Complete article PDF)

Rhodes, L. D., W. B. Nilsson, M. S. Strom. 1998. Sensitive detection of Renibacterium salmoninarum in whole fry, blood, and other tissues of Pacific salmon by reverse transcription-polymerase chain reaction. Molecular Marine Biology and Biotechnology, 7:270-279.

Strom, M. S. 1998. Phenotypic and genetic characterization of a non-hemolytic variant of Listeria monocytogenes from cold-smoked salmon. Food Microbiology, 15:329-337.

Van Beneden, R. J., L. D. Rhodes, G. R. Gardner. 1998. Studies of the molecular basis of gonadal tumors in the marine bivalve, Mya arenaria. Marine Environmental Research, 46:209-213.

1997

Barnett, T. C., S. M. Kirov, M. S. Strom, K. Sanderson. 1997. Aeromonas spp. possess at least two distinct type IV pilus families. Microbial Pathogenesis, 23:241-247.

Krause, M. K., L. D. Rhodes, R. J. Van Beneden. 1997. Cloning of the p53 tumor suppressor gene from the Japanese medaka (Oryzias latipes) and evaluation of mutational hotspots in MNNG-exposed fish. Gene, 189:101-106.

Lory, S., M. S. Strom. 1997. Structure and function relationship of type IV prepilin peptidase of Pseudomonas aeruginosa. Gene, 192:117-121.

Peterson, M. E., G. A. Pelroy, F. T. Poysky, R. N. Paranjpye, F. M. Dong, G. M. Pigott, M. W. Eklund. 1997. Heat-pasteurization process for inactivation of nonproteolytic types of Clostridium botulinum in picked dungeness crabmeat. Journal of Food Protection, 60:928-934.

Poysky, F. T., R. N. Paranjpye, M. E. Peterson, G. A. Pelroy, A. E. Guttman, M. W. Eklund. 1997. Inactivation of Listeria monocytogenes on Hot-smoked Salmon by the Interaction of Heat and Smoke or Liquid Smoke. Journal of Food Protection, 60:649-654.

Rhodes, L. D., R. J. Van Beneden. 1997. Isolation of the cDNA and characterization of mRNA expression of ribosomal protein S19 from the soft-shell clam, Mya arenaria. Gene, 197:295-304.

Rhodes, L. D., G. R. Gardner, R. J. Van Beneden. 1997. Short-term disposition and effects of [3H]TCDD exposure in soft-shell clams (Mya arenaria). Environmental Toxicology and Chemistry, 16:1888-1894.

Rhodes, L. D., G. R. Gardner, R. J. Van Beneden. 1997. Short-term tissue distribution, depuration,, and possible gene expression effects of [3H]TCDD exposure in soft-shell clams Mya arenaria. Environmental Toxicology and Chemistry, 16(9):1888-1894.

1996

Pepe, C. M., M. W. Eklund, M. S. Strom. 1996. Cloning of an Aeromonas hydrophila type IV pilus biogenesis gene cluster: Complementation of pilus assembly functions and characterization of a type IV leader peptidase/N-methyltransferase required for extracellular protein secretion. Molecular Microbiology, 19(4):857-869.

Rhodes, L. D., R. J. Van Beneden. 1996. Application of differential display polymerase chain reaction to the study of neoplasms of feral marine bivalves. Marine Environmental Research, 42:81-85.

1995

Eklund, M. W., F. T. Poysky, R. N. Paranjpye, L. C. Lashbrook, M. E. Peterson, G. A. Pelroy. 1995. Incidence and sources of Listeria monocytogenes in cold-smoked fishery products and processing plants. Journal of Food Protection, 58(5):502-508.

1994

Pelroy, G. A., M. E. Peterson, P. J. Holland, M. W. Eklund. 1994. Inhibition of Listeria monocytogenes in cold-process (smoked) salmon by sodium lactate. Journal of Food Protection, 57(2):108-113.

Pelroy, G. A., M. E. Peterson, R. N. Paranjpye, J. Almond, M. W. Eklund. 1994. Inhibition of Listeria monocytogenes in cold-process (smoked) salmon by sodium nitrite and packaging method. Journal of Food Protection, 57(2):114-119.

Rhodes, L. D., A. Paull, C. H. Sibley. 1994. Two different interferon nonresponsive variants of the B cell line, 70Z/3. Immunogenetics, 40:199-209.

Strom, M. S., D. N. Nunn, S. Lory. 1994. Post translational processing of type IV prepilin and its homologues by PilD of Pseudomonas aeruginosa. Methods in Enzymology, 235:527-540.

1993

Nilsson, W. B., J. K. Hudson. 1993. Solubility of simple and mixed triacylglycerols in supercritical CO2. J Am Oil Chem Soc, 70(8):749-754.

Peterson, M. E., G. A. Pelroy, R. N. Paranjpye, F. T. Poysky, J. Almond, M. W. Eklund. 1993. Parameters for Control of Listeria monocytogenes in smoked fishery products: Sodium chloride and packaging method. Journal of Food Protection, 56:938-943.

Poysky, F. T., R. N. Paranjpye, L. C. Lashbrook, M. E. Peterson, G. A. Pelroy, M. W. Eklund. 1993. Selective and Differential Medium for Isolation of Listeria monocytogenes from Foods. Journal of Food Protection, 56:326-329.

Strom, M. S., D. N. Nunn, S. Lory. 1993. A single bifunctional enzyme, PilD, catalyzes cleavage and N-methylation of proteins belonging to the type IV pilin family. Proceedings of the National Academy of Sciences, USA, 90:2404-2408.

Strom, M. S., P. Bergman, S. Lory. 1993. Identification of active site cysteines in the conserved domain of PilD, the bifunctional type IV pilin leader peptidase/N-methyltransferase of Pseudomonas aeruginosa. Journal of Biological Chemistry, 268:15788-15794.

Strom, M. S., S. Lory. 1993. Structure-function and biogenesis of the type IV pili. Annual Review of Microbiology, 47:565-596.

1992

Nilsson, W. B., G. Seaborn, J. K. Hudson. 1992. Partition Coefficients for Fatty Acid Ethyl Esters in Supercritical Fluid Carbon Dioxide Both With and Without Ethanol. J Am Oil Chem Soc, 69:305-308.

Paranjpye, R. N., G. A. Pelroy, M. E. Peterson, F. T. Poysky, P. J. Holland, L. C. Lashbrook, M. W. Eklund. 1992. Comparison of selective direct plating media for enumeration and recovery of Listeria monocytogenes from cold-process (smoked) fish. Journal of Food Protection, 55:905-909.

Strom, M. S., S. Lory. 1992. Kinetics and sequence specificity of processing of prepilin by PilD, the Type IV leader peptidase of Pseudomonas aeruginosa. Journal of Bacteriology, 174:7345-7351.

1991

Casillas, E., D. Misitano, L. L. Johnson, L. D. Rhodes, T. K. Collier, J. E. Stein, B. B. McCain, U. Varanasi. 1991. Inducibility of spawning and reproductive success of female English sole (Parophrys vetulus) from urban and nonurban areas of Puget Sound, Washington. Marine Environmental Research, 31:99-122.

Johnson, L. L., E. Casillas, M. S. Myers, L. D. Rhodes, O. P. Olson. 1991. Patterns of oocyte development and related changes in plasma 17β estradiol, vitellogenin, and plasma chemistry in English sole Parophrys vetulus Girard. Journal of Experimental Marine Biology and Ecology, 152:161-185.

Nilsson, W. B., E. J. Gauglitz Jr., J. K. Hudson. 1991. Solubilities of Methyl Oleate, Oleic acid, Oleyl Glycerols, and Oleyl Glycerol Mixtures in Supercritical Fluid Carbon Dioxide. J Am Oil Chem Soc, 68:87-91.

Strom, M. S., S. Lory. 1991. Amino acid substitutions in pilin of Pseudomonas aeruginosa: effect on leader peptide cleavage, amino-terminal methylation, and pilus assembly. Journal of Biological Chemistry, 266:1656-1664.

Strom, M. S., D. N. Nunn, S. Lory. 1991. Multiple roles of the pilus biogenesis protein PilD: Involvement of PilD in excretion of enzymes from Pseudomonas aeruginosa. Journal of Bacteriology, 173:1175-1180.

1990

Flagg, T. A., L. W. Harrell. 1990. Use of water-to-water transfers to maximize survival of salmonids stocked directly into seawater. Progressive Fish-Culturist, 52:127-129.

Harrell, L. W., T. L. Deardorff. 1990. Human nanophyetiasis: transmission by handling naturally infected coho salmon (Oncorhynchus kisutch). J. Inf. Dis., 161(1):146-148.

Landahl, J. T., B. B. McCain, M. S. Myers, L. D. Rhodes, D. W. Brown. 1990. Consistent associations between hepatic lesions in English sole (Parophrys vetulus ) and polycyclic aromatic hydrocarbons in bottom sediment. Environmental Health Perspectives, 89:195-203.

1989

Nilsson, W. B., E. J. Gauglitz Jr., J. K. Hudson. 1989. Supercritical Fluid Fractionation of Fish Oil Esters Using Incremental Pressure Programming and a Temperature Gradient. J. Am. Oil Chem. Soc., 66:1596-1600.

1988

Eklund, M. W., F. T. Poysky, L. M. Mseitif, M. S. Strom. 1988. Evidence for plasmid-mediated toxin and bacteriocin production in Clostridium botulinum type G. Appl. Environmental Microbiology, 54:1405-1408.

Eklund, M. W., M. E. Peterson, R. N. Paranjpye, G. A. Pelroy. 1988. Feasibility of a heat-pasteurization process for the inactivation of nonproteolytic Clostridium botulinum types B and E in vacuum-packaged, hot-process (smoked) fish. Journal of Food Protection, 51:720-726.

Lory, S., M. S. Strom, K. Johnson. 1988. Expression and secretion of the cloned Pseudomonas aeruginosa exotoxin A by Escherichia coli. Journal of Bacteriology, 170:714-719.

Myers, M. S., L. D. Rhodes. 1988. Morphologic similarities and parallels in geographic distribution of suspected toxicopathic liver lesions in rock sole (Lepidopsetta bilineata) starry flounder (Platichthys stellatus), Pacific staghorn sculpin (Leptocottus armatus), and dover sole (Microstomus pacificus) as compared to English sole (Parophrys vetulus) from urban and non-urban embaymens in Puget Sound, Washington. Aquatic Toxicology, 11:410-411.

Nilsson, W. B., E. J. Gauglitz Jr., J. K. Hudson, V. F. Stout, J. Spinelli. 1988. Fractionation of Menhaden Oil Ethyl Esters Using Supercritical Fluid CO2. J Am Oil Chem Soc, 65:109-117.

Stehr, C. M., L. D. Rhodes, M. S. Myers. 1988. The ultrastructure and histology of hepatocellular carcinomas of English sole (Parophrys vetulus) from Puget Sound, Washington. Toxicol. Path, 16(4):418-431.

1987

Elston, R. A., M. L. Kent, L. W. Harrell. 1987. An intranuclear microsporidium associated with acute anemia in the chinook salmon, Oncorhynchus tshawytscha. J. Protozool., 34(3):274-277.

Hardy, R. W., T. M. Scott, L. W. Harrell. 1987. Replacement of herring oil with menhaden oil, soybean oil, or tallow in the diets of Atlantic salmon raised in marine net-pens. Aquaculture, 65:267-277.

Myers, M. S., L. D. Rhodes, B. B. McCain. 1987. Pathologic anatomy and patterns of occurrence of hepatic neoplasms, putative preneoplastic lesions and other idiopathic hepatic conditions in English sole (Parophrys vetulus) from Puget Sound, Washington, U. S. A. J. Natl. Cancer Inst., 78(2):333-363.

Rhodes, L. D., M. S. Myers, W. D. Gronlund, B. B. McCain. 1987. Epizootic characteristics of hepatic and renal lesion in English sole (Parophrys vetulus ) from Puget Sound. Journal of Fish Biology, 31:395-407.

Smith, S. D., R. W. Gould, W. S. Zaugg, L. W. Harrell, C. V. Mahnken. 1987. Safe prerelease disease treatment with formalin for fall chinook salmon smolts. Progressive Fish-Culturist, 49:96-99.

Strom, M. S., S. Lory. 1987. Mapping of export signals of Pseudomonas aeruginosa pilin with alkaline phosphatase fusions. Journal of Bacteriology, 169:3181-3188.

1986

Harrell, L. W., R. A. Elston, T. M. Scott, M. T. Wilkinson. 1986. A significant new systemic disease of net-pen reared chinook salmon Oncorhynchus tshawytscha brood stock. Aquaculture, 55:249-262.

Strom, M. S., S. Lory. 1986. Cloning and expression of the pilin gene of Pseudomonas aeruginosa PAK in Escherichia coli. Journal of Bacteriology, 165:367-372.

1985

Casillas, E., M. S. Myers, L. D. Rhodes, B. B. McCain. 1985. Serum chemistry of diseased English sole, Parophrys vetulus Girard, from polluted areas of Puget Sound, Washington. Journal of Fish Diseases, 8:437-449.

Harrell, L. W., T. M. Scott. 1985. Kudoa thyrsitis (Gilchrist) (Myxosporea, Multivalvulidae) in Atlantic salmon Salmo salar. Journal of Fish Diseases, 8:324-332.

Malins, D. C., M. M. Krahn, D. W. Brown, L. D. Rhodes, M. S. Myers, B. B. McCain, S. Chan. 1985. Toxic chemicals in marine sediment and biota from Mukilteo, Washington: Relationships with hepatic neoplasms and other hepatic lesions in English sole (Parophrys vetulus)., 74:487-94.

Malins, D. C., M. M. Krahn, M. S. Myers, L. D. Rhodes, D. W. Brown, C. A. Krone, B. B. McCain, S. Chan. 1985. Toxic chemicals in sediments and biota from a creosote-polluted harbor: Relationships with hepatic neoplasms and other hepatic lesions in English sole (Parophrys vetulus). Carcinogenesis, 6:1463-9.

Pelroy, G. A., A. Scherer, M. E. Peterson, R. N. Paranjpye, M. W. Eklund. 1985. Inhibition of Clostridium botulinum type E toxin formation by potassium chloride and sodium chloride in hot-process (smoked) whitefish (Coregonus clupeaformis). Journal of Food Protection, 48:971-975.

Rhodes, L. D., E. Casillas, B. McKnight, W. D. Gronlund, M. S. Myers, O. P. Olson, B. B. McCain. 1985. Interactive effects of cadmium, polychlorinated biphenyls, and fuel oil on experimentally exposed English sole (Parophrys vetulus). Canadian Journal of Fisheries and Aquatic Sciences, 42:1870-1880.

1984

Malins, D. C., B. B. McCain, D. W. Brown, S. Chan, M. S. Myers, J. T. Landahl, P. G. Prohaska, A. J. Friedman, L. D. Rhodes, D. G. Burrows, W. D. Gronlund. 1984. Chemical pollutants in sediments and diseases in bottom-dwelling fish in Puget Sound, Washington. Environmental Science & Technology, 18:705-713.

Strom, M. S., M. W. Eklund, F. T. Poysky. 1984. Plasmids in Clostridium botulinum and related Clostridium species. Applied and Environmental Microbiology, 48:956-963.

1982

Eklund, M. W., G. A. Pelroy, R. N. Paranjpye, M. E. Peterson. 1982. Inhibition of Clostridium botulinum types A and E toxin production by liquid smoke and NaCl in hot-process, smoke-flavored fish. Journal of Food Protection, 45:935-941.

1978

Ellis, R. W., A. J. Novotny, L. W. Harrell. 1978. A report of kidney disease in a wild chinook salmon, Oncorhynchus tshawytscha in the sea. J. of Wildlife Diseases, 15:120-123.

Harrell, L. W. 1978. Vibriosis and current vaccination procedures in Puget Sound, WA. Marine Fisheries Review, 40(3):24-25.

1977

Harrell, L. W. 1977. Gallbladder lesions in cultured Pacific salmon. Fishery Bulletin, 75(4):884-887.

1976

Harrell, L. W., H. M. Etlinger, H. O. Hodgins. 1976. Humoral factors important in resistance of salmonid fish to bacterial disease. II. Anti-Vibrio anguillarum activity in mucus and observations on complement. Aquaculture, 7:363-370.

Harrell, L. W., A. J. Novotny, M. H. Schiewe, H. O. Hodgins. 1976. Isolation and description of two vibrios pathogenic to Pacific salmon. Fishery Bulletin, 74(2):447-449.

1975

Harrell, L. W., H. M. Etlinger, H. O. Hodgins. 1975. Humoral Factors important in resistance of salmonid fish to bacterial disease. I. Serum antibody protection of steelhead trout (Salmo gairdneri) against vibriosis. Aquaculture, 6:211-219.

Section

2004

Fairgrieve, W. T., C. L. Masada, W. C. McAuley, M. E. Peterson, M. S. Myers, M. S. Strom. 2004. Use of antibiotics and new vaccines to reduce mortality from bacterial kidney disease in chinook salmon: evaluation of toxic effects of long-term prophylactic use of azithromycin and erythromycin. Final Report for FY 1999-2002. In Berejikian, B. A., C. E. Nash. (Eds.) Research On Captive Broodstock Programs For Pacific Salmon. Report to Bonneville Power Administration for FY02, Project No. 1993-056-00, Contract No. 99-AI-17859.

Rhodes, L. D., C. K. Rathbone, L. W. Harrell, R. K. Andrews, M. S. Strom. 2004. Use of antibiotics and new vaccines to reduce mortality from bacterial kidney disease in chinook salmon: study the efficacy of other vaccines. Final report for FY02-FY03. In Berejikian, B. A., C. E. Nash. (Eds.) Research On Captive Broodstock Programs For Pacific Salmon. Report to Bonneville Power Administration for FY02, Project No. 1993-056-00, Contract No. 99-AI-17859.

2003

Fairgrieve, W. T., C. L. Masada, W. C. McAuley, M. E. Peterson, M. S. Meyers, M. S. Strom. 2003. Use of antibiotics and new vaccines to reduce mortality from bacterial kidney disease in chinook salmon: evaluation of toxic effects of long-term prophylactic use of azithromycin and erythromycin. Final Report for FY 1999-2002. In Berejikian, B. A., C. E. Nash. (Eds.) Research on captive broodstock programs for Pacific salmon Research, FY2002-2003. Annual Report to Bonneville Power Administration, Contract No. 99-AI-17859.

Rhodes, L. D., C. K. Rathbone, L. W. Harrell, R. K. Andrews, M. S. Strom. 2003. Use of antibiotics and new vaccines to reduce mortality from bacterial kidney disease in chinook salmon: study the efficacy of other vaccines. Final report for FY02-FY03. In Berejikian, B. A., C. E. Nash. (Eds.) Research on captive broodstock programs for Pacific salmon Research, FY2002-2003. Annual Report to Bonneville Power Administration, Contract No. 99-AI-17859.

2002

Strom, M. S., L. D. Rhodes, S. C. Corbett, C. K. Rathbone, L. W. Harrell. 2002. Use of antibiotics and new vaccines to reduce mortality from bacterial kidney disease in chinook salmon: study the efficacy of other vaccines. Final report for FY01 and FY02. In Berejikian, B. A., C. E. Nash. (Eds.) Research On Captive Broodstock Programs For Pacific Salmon. Report to Bonneville Power Administration for FY01, Project No. 1993-056-00, Contract No. 00005227.

2001

Stickle, W. B., C. K. Rathbone, S. Story. 2001. Parasitism of sea stars from Puget Sound, Washington by Orchitophrya stellarum. Pages 221-226 in Barker, M. (Ed.) chinoderms 2000.

Strom, M. S., S. Lory. 2001. Type IV Prepilin Leader Peptidases. Pages 127-159 in Dalbey, R. E., D. S. Sigman. (Eds.) The Enzymes, 3rd Edition, Volume 22, Co- and Posttranslational Proteolysis of Proteins. Academic Press.

Strom, M. S., L. W. Harrell, W. T. Fairgrieve, M. E. Peterson, C. K. Rathbone, L. D. Rhodes. 2001. Use of antibiotics and new vaccines to reduce mortality from Bacterial Kidney Disease in chinook salmon. Final report for FY00-FY01. In Berejikian, B. A., C. E. Nash. (Eds.) Research On Captive Broodstock Programs For Pacific Salmon. Report to Bonneville Power Administration for FY01, Project No. 1993-056-00, Contract No. 99-AI-17859.

2000

Strom, M. S., W. T. Fairgrieve, L. W. Harrell, C. K. Rathbone. 2000. Efficacy; toxicity of treatments for Bacterial Kidney Disease in chinook salmon. Pages 105-110 in Berejikian, B. A. (Ed.) Research on captive broodstock programs for Pacific salmon Research, FY2000 Annual Report to Bonneville Power Administration, Contract No. 99-AI-17859.

1997

Eklund, M. W., G. A. Pelroy, F. T. Poysky, R. N. Paranjpye, M. E. Peterson. 1997. Control of Clostridium botulinum and Listeria monocytogenes in Smoked Fishery Products. In Martin, R. (Ed.) Proceedings of the Fish Inspection, Quality Control and HACCP: Global Focus. Technomic Publishing Co, Lancaster, PA., USA.

1996

Eklund, M. W., G. A. Pelroy, F. T. Poysky, R. N. Paranjpye, M. E. Peterson. 1996. Clostridium botulinum and Listeria monocytogenes in smoked fishery products. Pages 1-7 in Pisott, G. M., J. Peters, P. Peyton. (Eds.) Proceedings of Third Annual Smoked Seafood Products Conference, Seattle, Washington , April 11-13, 1995.

Nilsson, W. B. 1996. Supercritical fluid extraction and fractionation of fish oils. Pages 180-209 in King, J. W., G. R. List. (Eds.) Supercritical fluid technology in oil and lipid chemistry. American Oil Chemists Society, Champaign, IL.

Rhodes, L. D., R. J. Van Beneden. 1996. Gene expression analysis in aquatic animals using differential display polymerase chain reaction. Pages 161-183 in Ostrander, G. K. (Ed.) Techniques in Aquatic Toxicology. Lewis Publishers, CRC Press, Boca Raton, FL.

1992

Krukonis, V. J., C. J. Bambara, J. E. Vivian, W. B. Nilsson, R. E. Martin. 1992. Concentration of Eicosapentaenoic Acid by Supercritical Fluid Extraction. A Design of a Continuous Process. Pages 169-179 in Flick, G. J. Jr., R. E. Martin. (Eds.) Advances in Seafood Biochemistry: Composition and Quality. Technomic Publishing Co., Inc., Lancaster, PA.

Nilsson, W. B., E. J. Gauglitz Jr., J. K. Hudson, F. M. Teeny, G. J. Flick Jr., R. E. Martin. 1992. Supercritical Fluid CO2 Fractionation of Fish Oil Esters. Pages 151-168 in Advances in Seafood Biochemistry: Composition and Quality. Technomic Publishing Co., Inc., Lancaster, PA.

1990

Flagg, T. A., L. W. Harrell, T. E. Ruehle, J. L. Mighell. 1990. Results of the Yakima Sockeye Project, 1989-1990. Page 2 in Proceedings of the 1990 Alaska Department of Fish and Game Sockeye Culture Workshop, Anchorage, AK.

Stout, V. F., W. B. Nilsson, J. Krzynowek, H. Schlenk. 1990. Fractionation of Fish Oils and Their Fatty Acids. In Stansby, M. (Ed.) Fish Oils in Nutrition. Van Nostrand Reinhold, New York.

1989

Flagg, T. A., L. W. Harrell. 1989. Net-pen isolation of prespawning sockeye salmon-- a promising method to avoid IHN. Page 1 in Proceedings of the 1989 American Fisheries Society, North Pacific International Chapter annual meeting, New Westminster, BC.

Nilsson, W. B., V. F. Stout, E. J. Gauglitz Jr., F. M. Teeny, J. K. Hudson. 1989. The Use of SC-CO2 Extraction in the Synthesis of Trieicosapentaenoyl Glycerol (Tri-EPA) from Fish Oil. Pages 434-448 in Johnson, K. P., J. M. Penninger. (Eds.) Supercritical Fluid Science and Technology ACS Symposium Series 406. American Chemical Society, Washington, DC.

1988

Harrell, L. W., T. A. Flagg. 1988. Yakima Basin sockeye salmon restoration feasibility study--IHN certification. Page 6 in Proceedings of the 1988 Alaska Department of Fish and Game Sockeye Culture Workshop, Ketchikan, AK.

Quinn, L. S., L. D. Rhodes, M. Nameroff. 1988. Characterization of sequential myogenic cell lineage compartments. Pages 37-46 in Stockdale, F., L. Kedes. (Eds.) Cellular & Molecular Biology of Muscle Development, UCLA Symposia on Molecular & Cellular Biology, vol 93.

Schiewe, M. H., A. J. Novotny, L. W. Harrell. 1988. Botulism of salmonids. Pages 336-338 in Sinderman, C. J., D. V. Lightner. (Eds.) Disease diagnosis and control in North American marine aquaculture. Elsevier Sci. Publ. Co., New York.

Schiewe, M. H., A. J. Novotny, L. W. Harrell. 1988. Miscellaneous diseases and diseases of unknown etiology. Pages 347-353 in Sinderman, C. J., D. V. Lightner. (Eds.) Disease diagnosis and control in North American marine aquaculture. Elsevier Sci. Publ. Co., New York.

Schiewe, M. H., A. J. Novotny, L. W. Harrell. 1988. Pacific salmon disease-general. Pages 319-322 in Sinderman, C. J., D. V. Lightner. (Eds.) Disease diagnosis and control in North American marine aquaculture. Elsevier Sci. Publ. Co., New York.

Schiewe, M. H., A. J. Novotny, L. W. Harrell. 1988. Parvicapsula disease of salmonids. Pages 341-343 in Sinderman, C. J., D. V. Lightner. (Eds.) Disease diagnosis and control in North American marine aquaculture. Elsevier Sci. Publ. Co., New York.

Schiewe, M. H., A. J. Novotny, L. W. Harrell. 1988. Systemic fungal disease of salmonids. Pages 344-346 in Sinderman, C. J., D. V. Lightner. (Eds.) Disease diagnosis and control in North American marine aquaculture. Elsevier Sci. Publ. Co., New York.

Schiewe, M. H., A. J. Novotny, L. W. Harrell. 1988. Vibriosis of salmonids. Pages 323-327 in Disease diagnosis and control in North American marine aquaculture. Elsevier Sci. Publ. Co., New York.

1984

Harrell, L. W., T. A. Flagg, A. J. Novotny. 1984. Broodstock restoration programs at Manchester Marine Experimental Laboratory, Puget Sound, Washington. Pages 92-95 in Proceedings of the 34th Annual Fish Culture Conference, Moscow, ID, 1983.

1977

Hodgins, H. O., M. H. Schiewe, A. J. Novotny, L. W. Harrell. 1977. Furunculosis of salmon. Pages 237-240 in Sinderman, C. J. (Ed.) Disease diagnosis and control in North American marine aquaculture. Elsevier Sci. Publ. Co., New York.

Hodgins, H. O., M. H. Schiewe, A. J. Novotny, L. W. Harrell. 1977. Kidney disease of salmon. Pages 241-244 in Sinderman, C. J. (Ed.) Disease diagnosis and control in North American marine aquaculture. Elsevier Sci. Publ. Co., New York.

Hodgins, H. O., M. H. Schiewe, A. J. Novotny, L. W. Harrell. 1977. Miscellaneous disease and diseases of unknown etiology. Pages 245-249 in Sinderman, C. J. (Ed.) Disease diagnosis and control in North American marine aquaculture. Elsevier Sci. Publ. Co., New York.

Hodgins, H. O., M. H. Schiewe, A. J. Novotny, L. W. Harrell. 1977. Pacific salmon disease-general. Pages 227-230 in Sinderman, C. J. (Ed.) Disease diagnosis and control in North American marine aquaculture. Elsevier Sci. Publ. Co., New York.

Hodgins, H. O., M. H. Schiewe, A. J. Novotny, L. W. Harrell. 1977. Vibriosis of salmon. Pages 231-236 in Sinderman, C. J. (Ed.) Disease diagnosis and control in North American marine aquaculture. Elsevier Sci. Publ. Co., New York.

Contract Report

In press

Wargo Rub, A. M., R. S. Brown, B. P. Sandford, K. A. Deters, L. G. Gilbreath, M. S. Myers, M. E. Peterson, R. A. Harnish, G. M. Matthews, I. W. Welch, D. W. Welch, J. A. Carter, J. W. Boyd, G. A. McMichael, E. E. Hockersmith. In press. Comparative performance of acoustic-tagged and passive integrated transponder-tagged juvenile salmonids in the Columbia and Snake Rivers, 2007. Report by NMFS/NWFSC to the U.S. Army Corps of Engineers. Portland District, Contract W66QKZ60441152, 161 p. DRAFT (Online Appendix: All Detections, Subyearling Chinook Salmon | Online Appendix: All Detections, Yearling Chinook Salmon | PDF)

2000

Strom, M. S., W. T. Fairgrieve, L. W. Harrell, C. K. Rathbone. 2000. Efficacy and toxicity of treatments for Bacterial Kidney Disease in chinook salmon. Report to the Bonneville Power Administration, Contract 99-AI-17859, 105-110 p.

1995

Swanson, P., T. A. Flagg, J. J. Hard, L. W. Harrell, K. D. Shearer, R. J. Pascho, W. K. Hershberger, K. C. Massee, R. W. Hardy. 1995. Research on Captive Broodstock Technology for Pacific Salmon, Annual Report 1995. Report to the Bonneville Power Administration, Contract 1993BP55064, Project No. 199305600, 220 p. (BPA Report DOE/BP-55064-2)

Technical Memorandum

2001

Nash, C. E., K. M. Brooks, W. T. Fairgrieve, R. N. Iwamoto, C. V. Mahnken, M. B. Rust, M. S. Strom, F. W. Waknitz. 2001. The net-pen salmon farming industry in the Pacific Northwest. U.S. Dept. of Commerce, NOAA Tech. Memo., NMFS-NWFSC-49, 125 p. (PDF | HTML)

2000

Flagg, T. A., B. A. Berejikian, J. Colt, W. W. Dickhoff, L. W. Harrell, D. J. Maynard, C. E. Nash, M. S. Strom, R. N. Iwamoto, C. V. Mahnken. 2000. Ecological and behavioral impacts of artificial production strategies on the abundance of wild salmon populations. U.S. Dept. of Commerce, NOAA Tech. Memo., NMFS-NWFSC-41, 92 p. (PDF | HTML)

Patent

2000

Eklund, M. W., F. T. Poysky, R. N. Paranjpye, L. C. Lashbrook, M. E. Peterson, G. A. Pelroy. 2000. Selective and Differential Medium for Isolation of Listeria monocytogenes.

Thesis

1995

Peterson, M. E. 1995. A thermal process for pasteurization of Dungeness crab (Cancer magister). Thesis (M.S.) University of Washington, 136 p.

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