Northwest Fisheries Science Center

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Anderson, S. C., E. J. Ward. 2018. Black swans in space: modelling spatiotemporal processes with extremes. Ecology.Go to metadata icon

Andrews, K. S., K. M. Nichols, A. Elz, N. Tolimieri, C. J. Harvey, R. Pacunski, D. Lowry, K. L. Yamanaka, D. M. Tonnes. 2018. Cooperative research sheds light on the listing status of threatened and endangered rockfish species. Conservation Genetics, 19(4):865-878. doi: to metadata icon

Auth, T. D., E. A. Daly, R. D. Brodeur, J. L. Fisher. 2018. Phenological and distributional shifts in ichthyoplankton associated with recent warming in the northeast Pacific Ocean. Global Change Biology, 24(1):259-272. doi:10.1111/gcb.13872Go to metadata icon

Bal, G., M. D. Scheuerell, E. J. Ward. 2018. Characterizing the strength of density dependence in at-risk species through Bayesian model averaging. Ecological Modelling, 381:1-9. doi:10.1016/j.ecolmodel.2018.04.012Go to metadata icon

Balmer, J. E., G. M. Ylitalo, T. K. Rowles, K. L. Mullin, R. S. Wells, F. I. Townsend, R. W. Pearce, J. L. Bolton, E. S. Zolman, B. C. Balmer, L. H. Schwacke. 2018. Persistent Organic Pollutants (POPs) in Blood and Blubber of Common Bottlenose Dolphins (Tursiops truncatus) at three Gulf of Mexico sites following the Deepwater Horizon Oil Spill. Science of the Total Environment.Go to metadata icon

Barceló, C., L. Ciannelli, R. D. Brodeur. 2018. Pelagic marine refugia and climatically sensitive areas in an eastern boundary current upwelling system. Global Change Biology, 24:668-680. doi:10.1111/gcb.13857Go to metadata icon

Berejikian BA, Van Doornik DM (2018) Increased natural reproduction and genetic diversity one generation after cessation of a steelhead trout (Oncorhynchus mykiss) conservation hatchery program. PLoS ONE 13(1): e0190799. pone.0190799Go to metadata icon

Berger, A. M. 2018. Character of temporal variability in stock productivity influences the utility of dynamic reference points. Fisheries Research.Go to metadata icon

Bond, M. H., T. G. Nodine, T. J. Beechie, R. W. Zabel. 2018. The next link will exit from NWFSC web site Estimating the benefits of widespread floodplain reconnection for Columbia River Chinook salmon. Canadian Journal of Fisheries and Aquatic Sciences.Go to metadata icon

Brodeur, R. D., M. E. Hunsicker, A. Hann, T. W. Miller. 2018. The next link will exit from NWFSC web site Effects of warming ocean conditions on feeding ecology of small pelagic fishes in a coastal upwelling ecosystem: a shift to gelatinous food sources. Marine Ecology Progress Series, Early view.Go to metadata icon

Chen, M. F., S. M. O'Neill, A. J. Carey, R. H. Conrad, B. A. Stewart, K. R. Snekvik, G. M. Ylitalo, P. K. Hershberger. 2018. Nanophyetus salmincola infection and toxic contaminant exposure in outmigrating Steelhead Trout from Puget Sound: implications for early marine survival. Journal of Aquatic Animal Health.Go to metadata icon

Chittaro, P. M., L. L. Johnson, D. J. Teel, P. Moran, S. Y. Sol, K. H. Macneale, R. W. Zabel. 2018. Variability in the performance of juvenile Chinook salmon is explained primarily by when and where they resided in estuarine habitats. Ecology of Freshwater Fish. doi:10.1111/eff.12398Go to metadata icon

Claxton, A. T., L. A. Weitkamp, K. C. Jacobson. 2018. Prevalence of the nematode parasite Hysterothylacium aduncum in a benthic amphipod Americorophium salmonis consumed by juvenile Chinook salmon (Oncorhynchus tshawytscha) in the Columbia River estuary. Northwest Science.Go to metadata icon

Cramer, Lori A., C. Flathers, D. Caracciolo, S.M.Russell, F. Conway. 2018. Graying of the fleet: Perceived impacts on coastal resilience and local policy. Marince Policy. 96, 27-35. Go to metadata icon

Cruz-Acevedo, E., N. Tolimieri, H. Aguirre-Villaseñor. 2018. Deep-sea fish assemblages (300-2100 m) in the Eastern Pacific off Northern Mexico. Marine Ecology Progress Series. doi: to metadata icon

Dolder, P. J., J. T. Thorson, C. Minto. 2018. The next link will exit from NWFSC web site Spatial separation of catches in highly mixed fisheries. Scientific Reports, 8:13886. doi:10.1038/s41598-018-31881-wGo to metadata icon

Elias, A., R. McLaughlin, R. Mackereth, C. Wilson, K. M. Nichols. 2018. Population structure and genomic variation of ecological life history diversity in wild-caught Lake Superior brook trout, Salvelinus fontinalis. Journal of Great Lakes Research, 44(6):1373-1382. doi: to metadata icon

Emmons, C. K., J. J. Hard, M. E. Dahlheim, J. Waite. 2018. Quantifying variation in killer whale (Orcinus orca) morphology using elliptical Fourier analysis. Marine Mammal Science. doi: to metadata icon

Farmer, N. A., D. P. Noren, E. M. Fougères, A. Machernis, K. Baker. 2018. Resilience of the endangered sperm whale Physeter microcephalus to foraging disturbance in the Gulf of Mexico, USA: A bioenergetic approach. Marine Ecology Progress Series, 589:241-261. doi:DOI: to metadata icon

Farmer, N. A., K. Baker, D. G. Zeddies, S. L. Denes, D. P. Noren, L. Garrison, A. Machernis, E. M. Fougères, M. Zykov. 2018. Population consequences of disturbance by offshore oil and gas activity for endangered sperm whales (Physeter macrocephalus). Biological Conservation, 227:189-204. doi: to metadata icon

Fonner, R., A. K. Bohara, S. Archambault. 2018. Migration Choices during Conflict in Nepal: Pull forces and landscape interactions. International Journal of Development and Conflict, 8(3):46-61.Go to metadata icon

Ford, M. J., K. M. Parsons, E. J. Ward, J. Hempelmann, C. K. Emmons, M. B. Hanson, K. C. Balcomb, L. K. Park. 2018. Inbreeding in an endangered killer whale population. Animal Conservation.Go to metadata icon

Francis, T. B., P. S. Levin, A. E. Punt, I. C. Kaplan, A. Varney, K. C. Norman. 2018. Linking knowledge to action in ocean ecosystem management: The Ocean Modeling Forum. Elementa: Science of the Anthropocene, 6(1):63.Go to metadata icon

Freshwater, C., B. J. Burke, M. D. Scheuerell, S. C. Grant, M. Trudel, F. Juanes. 2018. Coherent population dynamics associated with sockeye salmon juvenile life history strategies. Canadian Journal of Fisheries and Aquatic Sciences, 75:1346-1356. doi:10.1139/cjfas-2017-0251Go to metadata icon

Friedman, W.R., J.A. Santora, I.D. Schroeder, D.D. Huff, R.D. Brodeur, J.C. Field,  B.K. Wells.  2018. Environmental and geographic relationships among salmon forage assemblages along the continental shelf of the California Current. Marine Ecology Progress Series. 596:181-198Go to metadata icon

Fullerton, A. H., C. E. Torgersen, J. J. Lawler, E. A. Steel, J. L. Ebersole, S. Y. Lee. 2018. Longitudinal thermal heterogeneity in rivers and refugia for coldwater species: effects of scale and climate change. Aquatic Sciences, 80(3):1-15.Go to metadata icon

Gamble, M. M., K. A. Connelly, J. R. Gardner, L. A. Campbell, J. W. Chamberlin, K. I. Warheit, D. A. Beauchamp. 2018. Size-selective mortality of hatchery and wild sub-yearling Chinook salmon (Oncorhynchus tshawytscha) during early marine life stages in Puget Sound. Transactions of the American Fisheries Society.Go to metadata icon

Gavery, M., K. M. Nichols, G. W. Goetz, M. A. Middleton, P. Swanson. 2018. Characterization of Genetic and Epigenetic Variation in Sperm and Red Blood Cells from Adult Hatchery and Natural-Origin Steelhead, Oncorhynchus mykiss. Genes, Genomes, Genetics, 8(11):3723-3736. doi: to metadata icon

Goethel, D. R., S. Lucey, A. M. Berger, S. Gaichas, M. Karp, P. D. Lynch, J. K. Walter, J. J. Deroba, S. Miller, M. Wilberg. 2018. Closing the Feedback Loop: On Stakeholder Participation in Management Strategy Evaluation. Canadian Journal of Fisheries and Aquatic Sciences.Go to metadata icon

Gosselin, J. L., R. W. Zabel, J. J. Anderson, J. R. Faulkner, A. M. Baptista, B. P. Sandford. 2018. The next link will exit from NWFSC web site Conservation planning for freshwater carryover effects on Chinook salmon survival. Ecology and Evolution, 8(1):319-332.Go to metadata icon

Gruss, A., J. T. Thorson, B. Babcock, J. H. Tarnecki. 2018. The next link will exit from NWFSC web site Producing distribution maps for informing ecosystem-based fisheries management using a comprehensive survey database and spatio-temporal models. ICES Journal of Marine Science, 75(1):158¿177. doi:10.1093/icesjms/fsx120Go to metadata icon

Guldin, M., C. M. Anderson. 2018. Catch Shares and Shoreside Processors: A Costs and Earnings Exploration into the Downstream Sector. Marine Resource Economics, 33(3):289-307. doi: to metadata icon

Guzman, J. M., J. A. Luckenbach, D. A. da Silva, E. S. Hayman, G. M. Ylitalo, F. W. Goetz, P. Swanson. 2018. Seasonal variation of pituitary gonadotropin subunit, brain-type aromatase and sex steroid receptor mRNAs, and plasma steroids during gametogenesis in wild sablefish. Comparative Biochemistry and Physiology Part A: Physiology, 219-220:48-57. doi: to metadata icon

Hale, M., G. McKinney, F. P. Thrower, K. M. Nichols. 2018. Evidence of sex-bias in gene expression in the brain transcriptome of two populations of rainbow trout (Oncorhynchus mykiss) with divergent life histories. PLoS ONE, 13(2):e0193009. doi: to metadata icon

Hall, A. J., B. J. McConnell, L. H. Schwacke, G. M. Ylitalo, R. Williams, T. K. Rowles. 2018. Predicting the effects of polychlorinated biphenyls on cetacean populations through impacts on immunity and calf survival. Environmental Pollution.Go to metadata icon

Hall, J. E., C. M. Greene, O. Stefankiv, J. H. Anderson, B. Timpane-Padgham, G. R. Pess, T. J. Beechie. 2018. The next link will exit from NWFSC web site Large river habitat complexity and productivity of Chinook salmon in Puget Sound Rivers. PLoS ONE, 13(11):e0205127.Go to metadata icon

Hall, J. E., T. P. Khangaonkar, C. A. Rice, J. W. Chamberlin, T. Zackey, F. E. Leonetti, M. Rustay, K. L. Fresh, A. N. Kagley, M. Rowse. 2018. The next link will exit from NWFSC web site Characterization of annual salinity and temperature patterns in a large river delta to support tidal wetland habitat restoration efforts. Northwest Science, 92(1):36-52.Go to metadata icon

Hampton, S. E., M. D. Scheuerell, M. J. Church, J. M. Melack. 2018. The next link will exit from NWFSC web site Long-term perspectives in aquatic research. Limnology and Oceanography, 64(S1):S2-S10.Go to metadata icon

Hard, J. J. 2018. Robin S. Waples - Recipient of the 2018 Molecular Ecology Prize. Molecular Ecology.Go to metadata icon

Harstad, D. L., D. A. Larsen, J. Miller, I. Adams, D. K. Spangenberg, S. L. Nance, L. Rohrbach, J. Murauskas, B. R. Beckman. 2018. Winter-rearing temperature affects growth profiles, age of maturation and smolt-to-adult returns for yearling summer Chinook Salmon in the upper Columbia River basin. North American Journal of Fisheries Management.Go to metadata icon

Haukenes, A. H., J. Bumgarner, B. P. Sandford. 2018. The next link will exit from NWFSC web site Evaluation of electronarcosis as a tool for collection of biological data from adult steelhead. North American Journal of Aquaculture, 1548-8454 online. doi:10.1002/naaq.10039Go to metadata icon

Heery, E., A. Y. Green, B. E. Feist, K. P. Sebens. 2018. Urbanization-related distribution patterns and habitat-use by the marine mesopredator, giant Pacific octopus (Enteroctopus dofleini). Urban Ecosystems. doi:10.1007/s11252-018-0742-1Go to metadata icon

Henderson, M. J., I. S. Iglesias, C. J. Michel, A. J. Ammann, D. D. Huff. 2018. The next link will exit from NWFSC web site Estimating spatial-temporal differences in Chinook salmon outmigration survival with habitat and predation related covariates. Canadian Journal of Fisheries and Aquatic Sciences, Early view.Go to metadata icon

The next link will exit from NWFSC web site Henderson M, Fiechter J, Huff DD, Wells BK. 2018. Spatial variability in ocean-mediated growth potential is linked to Chinook salmon survival. Fish Oceanogr. 00:1-11. to metadata icon

Hendricks, S,  E.C. Anderson, T. Antao, L. Bernatchez, B.R. Forester, B. Garner, B.K. Hand, P.A. Hohenlohe, M. Kardo, B. Koop, A. Sethuraman, R. S. Waples, G. Luikart.  2018. Recent advances in population genomics data analysis.  Evolutionary Applications (published online 8 June 2018; to metadata icon

Hipfner, M. J., M. Galbraith, S. Tucker, K. R. Studholme, A. D. Domalik, S. F. Pearson, T. P. Good, P. S. Ross, P. J. Hodum. Two forage fishes as potential conduits for the vertical transfer of microfibres in Northeastern Pacific Ocean food webs. Environmental Pollution 239: 215-222.Go to metadata icon

Hocking, D. J., J. T. Thorson, K. O'Neil, B. H. Letcher. 2018. A geostatistical state-space model of animal densities for stream networks. Ecological Applications, 28(7):1782-1796. doi:10.1002/eap.1767Go to metadata icon

Hodgson, E. E., I. C. Kaplan, K. Marshall, J. L. Leonard, T. E. Essington, D. S. Busch, E. A. Fulton, C. J. Harvey, A. J. Hermann, P. McElhany. 2018. Consequences of spatially variable ocean acidification in the California Current: lower pH drives strongest declines in benthic species in southern regions while greatest economic impacts occur in northern regions. Ecological Modelling.Go to metadata icon

Holland, D.S. 2018. Collective Rights-Based Fishery Management (CRBFM) ¿ A Path to Ecosystem-Based Fishery Management. Annual Review of Resource Economics, Forthcoming.Go to metadata icon

Jackson, T. M., G. C. Roegner, K. g. OMalley. 2018. Evidence for interannual variation in genetic structure of Dungeness crab (Cancer magister) along the California Current System. Molecular Ecology, 27:352-368. doi:doi: 10.1111/mec.14443Go to metadata icon

Johansson, M. L., M. N. Litz, R. D. Brodeur, T. A. Britt, J. R. Hyde, M. A. Banks. 2018. Seasonal distribution and environmental associations among late larval and juvenile rockfish (Sebastes spp.) off Oregon and Washington: new insights based on genetics. Fishery Bulletin, 116(3-4):266-280. doi:10.7755/FB.116.3-4.5Go to metadata icon

Kaplan, I. C., T. B. Francis, A. E. Punt, L. E. Koehn, E. N. Curchitser, F. Hurtado-Ferro, K. F. Johnson, S. Lluch-Cota, W. J. Sydeman, T. E. Essington, N. G. Taylor, K. K. Holsman, A. D. MacCall, P. S. Levin. 2018. A multi-model approach to understanding the role of Pacific sardine in the California Current food web. Marine Ecology Progress Series.Go to metadata icon

Keller, A. A., P. H. Frey, J. R. Wallace, M. A. Head, C. R. Wetzel, J. M. Cope, J. H. Harms. 2018. Canary rockfishes (Sebastes pinniger) return from the brink: catch, distribution and life history along the U.S. west coast (Washington to California). Marine Ecology Progress Series.Go to metadata icon

Kiffney, P. M., B. Cram, P. Faulds, K. Burton, M. E. Koehler, T. P. Quinn. 2018. Spatiotemporal patterns of mountain whitefish (Prosopium williamsoni) in response to a restoration of longitudinal connectivity. Ecology of Freshwater Fish.Go to metadata icon

Kiffney, P. M., N. Sean, C. Jeremy, M. Liermann, D. G. Burrows. 2018. The next link will exit from NWFSC web site Multiple pathways of C and N incorporation by consumers across an experimental gradient of salmon carcasses. Ecosphere, 9(4):e02197.Go to metadata icon

Kwong, L., E. A. Pakhom0v, A. V. Suntsov, M. P. Seki, R. D. Brodeur, L. G. Pakhomova, R. Domokos. 2018. AN INTERCOMPARISON OF THE TAXONOMIC AND SIZE COMPOSITION OF TROPICAL MICRONEKTON BASED UPON SEVERAL SAMPLING GEARS. Deep Sea Research Part I: Oceanographic Research, 135:34-45. to metadata icon

Lagadic, L., I. Katsiadaki, R. Biever, P. D. Guiney, N. Karouna-Renier, T. Schwarz, J. P. Meador. 2018. Tributyltin: Advancing the science on assessing endocrine disruption with an unconventional endocrine-disrupting compound. Reviews of Environmental Contamination and Toxicology, 245:65-127. doi:10.1007/398_2017_8Go to metadata icon

Lee, Q., J. T. Thorson, V. V. Gertseva, A. E. Punt. 2018. The benefits and risks of incorporating climate-driven growth variation into stock assessment models, with application to Splitnose Rockfish (Sebastes diploproa). ICES Journal of Marine Science, 75(1):245-256.Go to metadata icon

Levin, P. S., T. E. Essington, K. N. Marshall, L. E. Koehn, L. Anderson, A. Bundy, C. Carothers, F. Coleman, L. R. Gerber, J. H. Grabowski, E. Houde, O. Jensen, C. Möllmann, K. A. Rose, J. N. Sanchirico, A. D. Smith. 2018. Building effective Fishery Ecosystem Plans. Marine Policy.Go to metadata icon

Litz, M. N., J. A. Miller, R. D. Brodeur, E. A. Daly, L. A. Weitkamp, A. G. Hansen. 2018. The next link will exit from NWFSC web site Energy dynamics of subyearling Chinook salmon reveal the importance of piscivory to short term growth during early marine residence. Fisheries Oceanography, Early view.Go to metadata icon

Lomeli, M.J.M., W.W. Wakefield and Herrmann. 2018. Illuminating the headrope of a selective flatfish trawl: effect on catches of groundfishes, including Pacific halibut. Marine and Coastal Fisheries: Dynamics, Management, and Ecosystem Science 10:118-131.Go to metadata icon

Lotliker, A.A., Baliarsingh, S.K., Trainer, V.L., Wells, M.L., Wilson, C., Bhaskar, T.V.S.U., Samanta, A., Shahimol, S.R. 2018. Characterization of oceanic Noctiluca blooms not associated with hypoxia in the Northeastern Arabian Sea. Harmful Algae. 74: 46-57.Go to metadata icon

Lundin, Jessica I., Gina M. Ylitalo, Deborah A. Giles, Elizabeth A. Seely, Bernadita F. Anulacion, Daryle T. Boyd, Jennifer A. Hempelmann, Kim M. Parsons, Rebecca K. Booth, and Samuel K. Wasser. "Pre-oil spill baseline profiling for contaminants in Southern Resident killer whale fecal samples indicates possible exposure to vessel exhaust." Marine pollution bulletin 136 (2018): 448-453.Go to metadata icon

Lutz, R. A., J. D. Goodwin, B. S. Baldwin, G. Burnell, M. Castagna, S. Chapman, A. Chestnut, P. Dabinett, A. G. Eversole, S. C. Fuller, S. M. Gallager, R. Goldberg, J. Goodsell, J. Grassle, R. G. Gustafson, H. Hidu, Y. Hu, D. Jablonski, S. Johnson, V. S. Kennedy, M. Le Pennec, R. Mann, C. Newell, E. W. North, A. S. Pooley, A. S. Tan, R. C. Vrijenhoek. 2018. Scanning electron microscopic aids for identification of larval and post-larval bivalves. Journal of Shellfish Research, 37(2):247-448. doi: to metadata icon

Manhard, C. V., M. Adkinson, J. J. Hard, W. W. Smoker, A. J. Gharrett. 2018. Local adaptation of phenology revealed in outcrosses between spawning segments of a salmonid population. Molecular Ecology. doi:10.1111/mec.14908Go to metadata icon

Marandel F, Lorance P,  Berthelé O, Trenkel VM, Waples RS, Lamy J-B. 2019. Estimating effective population size of large fish populations, is it feasible?   Fish and Fisheries 20:189-198 (DOI: 10.1111/faf.12338)Go to metadata icon

Marshall, K. N., J. T. Duffy-Anderson, E. Ward, S. Anderson, M. E. Hunsicker, B. Williams. 2018. Long-term trends in ichthyoplankton assemblage structure, biodiversity, and community synchrony in the Gulf of Alaska and their relationships to ocean conditions. Progress in Oceanography.Go to metadata icon

Marshall, K. N., L. E. Koehn, P. S. Levin, T. E. Essington, O. Jensen. 2018. Inclusion of ecosystem information in U.S. fish stock assessments suggests movement towards ecosystem-based fisheries management. ICES Journal of Marine Science. doi: to metadata icon

Masi, M., C. H. Ainsworth, I. C. Kaplan, M. J. Schirripa. 2018. Evaluation of robust single-species harvest control rules for managing reef fish in the Gulf of Mexico. Marine and Coastal Fisheries.Go to metadata icon

McIntyre, J.K., Lundin, J.I., Cameron, J.R., Chow, M.I., Davis, J.W., Incardona, J.P., and Scholz, N.L. 2018. Interspecies variation in susceptibility of adult Pacific salmon to toxic urban stormwater runoff. Environmental Pollution, 238:196-203.Go to metadata icon

Meador, J. P., A. Yeh, E. P. Gallagher. 2018. Adverse metabolic effects in fish exposed to contaminants of emerging concern in the field and laboratory. Environmental Pollution, 236:850-861. doi:10.1016/j.envpol.2018.02.007Go to metadata icon

Michel, C. J., J. M. Smith, N. J. Demetras, D. D. Huff, S. A. Hayes. 2018. The next link will exit from NWFSC web site Non-native fish predator density and molecular-based diet estimates suggest differing impacts of predator species on juvenile salmon in the San Joaquin River, California. San Francisco Estuary and Watershed Science, 16(4):article 3.Go to metadata icon

Milligan BG, FI Archer, A-L Ferchaud, BK Hand, EM Kierepka, and RS Waples.  2018. Disentangling genetic structure for genetic monitoring of complex populations.  Evolutionary Applications 11:1149-1161Go to metadata icon

Morris, J.M., Gielazyn, M., Krasnec, M.O., Takeshita, R., Forth, H.P., Labenia, J.S., Linbo, T.L., French, B.L., Gill, J.A., Baldwin, D.H., Scholz, N.L., and Incardona, J.P. 2018. Deepwater Horizon crude oil toxicity to red drum early life stages is independent of dispersion energy. Chemosphere, 213:205-214.Go to metadata icon

Nahorniak, M., J. M. Wheaton, C. J. Volk, P. Bailey, M. Reimer, C. E. Wall, K. Whitehead, C. E. Jordan. 2018. How do we efficiently generate high-resolution hydraulic models at large numbers of riverine reaches? Computers and Geosciences.Go to metadata icon

Naman, S. M., J. S. Rosenfeld, P. M. Kiffney, J. S. Richardson. 2018. The energetic consequences of habitat structure for forest stream salmonids. Journal of Animal Ecology. doi: to metadata icon

Neely, M. G., J. S. Morey, P. Anderson, B. C. Balmer, G. M. Ylitalo, E. S. Zolman, T. Speakman, C. Sinclair, M. Bachman, K. Huncik, J. R. Kucklick, P. E. Rosel, K. L. Mullin, T. K. Rowles, L. H. Schwacke, F. M. Van Dolah. 2018. Skin Transcriptomes of common bottlenose dolphins (Tursiops truncatus) from the Northern Gulf of Mexico and Southeastern U.S. Atlantic Coast. Marine Genomics.Go to metadata icon

Neubauer, P., J. T. Thorson, M. Melnychuk, R. D. Methot, K. Blackhart. 2018. The next link will exit from NWFSC web site Drivers and rates of stock assessments in the United States. PLoS ONE. doi:10.1371/journal.pone.0196483Go to metadata icon

Neuman, M. J., S. Wang, S. Busch, C. Friedman, K. Gruenthal, R. G. Gustafson, D. Kushner, K. Stierhoff, G. VanBlaricom, S. Wright. 2018. A Status Review of Pinto Abalone (Haliotis kamtschatkana) Along the West Coast of North America: Interpreting Trends, Addressing Uncertainty, and Assessing Risk for a Wide-ranging Marine Invertebrate. Journal of Shellfish Research, 37(4):869-910. doi:10.2983/035.037.0415Go to metadata icon

Nogueira A, Tolimieri N, González-Troncoso D (2018) Using multivariate state-space models to examine commercial stocks of redfish (Sebastes spp.) on the Flemish Cap. Can J Fish Aquat Sci:1-9. doi: 10.1139/cjfas-2017-0435Go to metadata icon

Noren, D. P. 2018. Whales: Their Biology and Behavior. Edited by Philip Hammond, Sonja Heinrich, Sascha Hooker, and Peter Tyack. Comstock Publishing Associates (New York): Cornell University Press. 2017. Quarterly Review of Biology, 93:173-174.Go to metadata icon

Ohlberger, J., E. J. Ward, B. Lewis, D. E. Schindler. 2018. Demographic changes in Chinook salmon across the Northeast Pacific Ocean. Fish and Fisheries.Go to metadata icon

Olsen, E., I. C. Kaplan, C. H. Ainsworth, G. Fay, S. K. Gaichas, R. J. Gamble, R. Girardin, H. N. Morzaria Luna, C. Hansen, K. Johnson, M. Savina-Rolland, H. M. Townsend, M. Weijerman, E. A. Fulton, J. S. Link. 2018. Ocean futures as explored using a worldwide suite of ecosystem models. Frontiers in Marine Science.Go to metadata icon

Peter, K.T., Tian, Z., Wu, C., Lin, P., White, S., Du, B., McIntyre, J.K., Scholz, N.L., and Kolodziej, E.P. 2018. Using high-resolution mass spectrometry to identify organic contaminants linked to an urban stormwater mortality syndrome in coho salmon. Environmental Science and Technology, 52:10317-10327.Go to metadata icon

Phillips, E. M., J. K. Horne, J. Adams, J. E. Zamon. 2018. Selective occupancy of a persistent yet variable coastal river plume by two seabird species. Marine Ecology Progress Series, 594:245-261. doi: to metadata icon

Punt, A. E., D. K. Okamoto, A. D. MacCall, A. O. Shelton, D. R. Armitage, J. S. Cleary, I. P. Davies, S. C. Dressel, T. B. Francis, P. S. Levin, R. R. Jones, H. Kitka, L. C. Lee, J. McIssac, M. R. Poe, S. Reifenstuhl, J. J. Silver, T. F. Thornton, R. Voss, J. Woodruff. 2018. When are estimates of spawning stock biomass for small pelagic fishes improved by taking spatial structure into account? Fisheries Research.Go to metadata icon

Quaempts, E. J., K. L. Jones, S. J. O'Daniel, T. J. Beechie, G. C. Poole. 2018. The next link will exit from NWFSC web site Aligning environmental management with ecosystem resilience: a First Foods example from the Confederated Tribes of the Umatilla Indian Reservation, Oregon, USA. Ecology and Society, 23(2):article 29.Go to metadata icon

Richerson, K., J. L. Leonard, D. S. Holland. 2018. Predicting the economic impacts of the 2017 West Coast salmon troll ocean fishery closure. Marine Policy.Go to metadata icon

Ritzman, J., A. Brodbeck, S. Brostrom, S. McGrew, S. Dreyer, T. Klinger, S. K. Moore. 2018. Economic and sociocultural impacts of fisheries harvest closures in two fishing-dependent communities following the massive 2015 U.S. West Coast harmful algal bloom. Harmful Algae.Go to metadata icon

Roni, P., P. Anders, T. J. Beechie, D. J. Kaplowe. 2018. Review of tools for identifying, planning and implementing habitat restoration for Pacific salmon and Steelhead. North American Journal of Fisheries Management.Go to metadata icon

Rudd, M., J. T. Thorson. 2018. The next link will exit from NWFSC web site Accounting for variable recruitment and fishing mortality in length-based stock assessments for data-limited fisheries. Canadian Journal of Fisheries and Aquatic Sciences, 75(7):1019-1035. doi:10.1139/cjfas-2017-0143Go to metadata icon

Suzanne M. Russell, Max Van Oostenburg & Ashley Vizek (2018): Adapting to
Catch Shares: Perspectives of West Coast Groundfish Trawl Participants, Coastal Management, 46:6, 603-620, DOI: 10.1080/08920753.2018.1522491Go to metadata icon

Sato, M., J. A. Barth, K. J. Benoit-Bird, S. D. Pierce, T. J. Cowles, R. D. Brodeur, W. T. Peterson. 2018. Upwelling front as a boundary for planktivorous fish distributions. Marine Ecology Progress Series, 595:171-186.Go to metadata icon

Saunders, W. C., N. Bouwes, P. A. McHugh, C. E. Jordan. 2018. A network model for primary production highlights linkages between riverine fish populations and autochthonous resources. Ecosphere.Go to metadata icon

Schwenke, P. L., L. K. Park, L. Hauser. 2018. Introgression among three rockfish species (Sebastes spp.) In the Salish Sea, Northeast Pacific Ocean. PLoS ONE, 13(3):e0194068. doi: to metadata icon

Seixas, G. B., T. J. Beechie, C. Fogel, P. M. Kiffney. 2018. Influence of channel width on stream shade and temperature change in a forested catchment. Journal of American Water Resources Association.Go to metadata icon

Shelton, A. O., C. J. Harvey, J. F. Samhouri, K. S. Andrews, B. E. Feist, K. E. Frick, N. Tolimieri, G. Williams, L. Antrim, H. D. Berry. 2018. From the predictable to the unexpected: kelp forest and benthic invertebrate community dynamics following decades of sea otter expansion. Oecologia, 188(4):1105-1119. doi: to metadata icon

Siple, M. C., A. O. Shelton, T. B. Francis, D. Lowry, A. Lindquist, T. E. Essington. 2018. Contributions of adult mortality to declines of Puget Sound Pacific herring. ICES Journal of Marine Science.Go to metadata icon

Sobocinski, K.L., L. Ciannelli, W.W. Wakefield, M.E. Yergey, and A. Johnson-Colegrove. 2018.Distribution and abundance of juvenile demersal fishes in relation to summer hypoxia and other environmental variables in coastal Oregon, USA. Estuarine, Coastal and Shelf Science 205:75-90.Go to metadata icon

Steel, E. A., A. Marsha, A. H. Fullerton, J. D. Olden, N. Larkin, S. Y. Lee, A. Ferguson. 2018. Thermal landscapes in a changing climate: biological implications of water temperature patterns in an extreme year. Canadian Journal of Fisheries and Aquatic Sciences. doi: to metadata icon

Erin Steiner, Suzanne Russell, Ashley Vizek & Amanda Warlick (2018) Crew in the West Coast Groundfish Catch Share Program: Changes in Compensation and Job Satisfaction, Coastal Management, 46:6, 656-676, DOI: 10.1080/08920753.2018.1522495Go to metadata icon

Stern, R., S. K. Moore, V. L. Trainer, B. D. Bill, A. Fischer, S. Batten. 2018. Spatial and temporal patterns of Pseudo-nitzschia genetic diversity in the North Pacific Ocean from the Continuous Plankton Recorder survey. Marine Ecology Progress Series, 606:7-28. to metadata icon

Stimmelmayr, R., G. M. Ylitalo, G. Sheffield, K. B. Beckmen, K. A. Burek-Huntington, V. Metcalf, T. K. Rowles. 2018. Oil fouling in subsistence-harvested ringed (Phoca hispida) and spotted seals (Phoca largha) from the Bering Strait region, Alaska: Polycyclic aromatic hydrocarbon bile and tissue levels and pathological findings. Marine Pollution Bulletin.Go to metadata icon

Stock, B., A. L. Jackson, E. J. Ward, A. C. Parnell, D. L. Phillips, B. X. Semmens. 2018. Analyzing mixing systems using a new generation of Bayesian tracer mixing models. PeerJ.Go to metadata icon

Stock, B., E. J. Ward, J. T. Thorson, J. E. Jannot, B. X. Semmens. 2018. The utility of spatial model-based estimators of unobserved bycatch. ICES Journal of Marine Science, fsy153. doi: to metadata icon

Stuart, K., R. Johnson, L. Armbruster, M. Drawbridge. 2018. Arachidonic acid in the diet of captive yellowtail and its effects on egg quality. North American Journal of Aquaculture, 80:97-106. doi:10.1002/naaq.10003Go to metadata icon

Sutherland, K. R., H. L. Sorensen, O. N. Blondheim, R. D. Brodeur, A. Galloway. 2018. The next link will exit from NWFSC web site Range expansion of tropical pyrosomes in the northeast Pacific Ocean. Ecology, 99(10):2397-2399.Go to metadata icon

Tallis, H., G. Bratman, J. F. Samhouri, J. Fargione. 2018. Are California Elementary School Test Scores More Strongly Associated with Urban Trees Than Poverty? Frontiers in Environmental Psychology. doi: to metadata icon

Thom, R. M., S. A. Breithaupt, H. L. Diefenderfer, A. Borde, G. C. Roegner, G. Johnson, D. L. Woodruff. 2018. Storm-Driven Particulate Organic Matter Flux Connects a Tidal Tributary Floodplain Wetland, Main Stem River, and Estuary. Ecological Applications. doi:DOI:10.1002/eap.1759Go to metadata icon

Thorson, J. T. 2018. Three problems with the conventional delta-model for biomass sampling data, and a computationally efficient alternative. Canadian Journal of Fisheries and Aquatic Sciences, 75(9):1369-1382. doi:10.1139/cjfas-2017-0266Go to metadata icon

Thorson, J. T., M. D. Scheuerell, J. D. Olden, D. E. Schindler. 2018. Spatial heterogeneity contributes more to portfolio effects than species differences in bottom-associated marine fishes. Proceedings of the Royal Society of London. Series B.Go to metadata icon

Tolimieri, N., M. A. Haltuch, Q. Lee, M. Jacox, S. J. Bograd. 2018. Ooceanographic drivers of sablefish recruitment in the California Current. Fisheries Oceanography, 00:1-17. doi:10.1111/fog.12266Go to metadata icon

Trick, C. G., V. L. Trainer, W. P. Cochlan, M. L. Wells, B. F. Beall. 2018. The successional formation and release of domoic acid in a Pseudo-nitzschia bloom in the Juan de Fuca Eddy: a drifter study. Harmful Algae.Go to metadata icon

Turner, J. W., J. J. Tallman, A. Macias, L. J. Pinnell, N. Elledge, D. N. Azadani, W. B. Nilsson, R. N. Paranjpye, R. N. Paranjpye, E. V. Armbrust, M. S. Strom. 2018. Comparative Genomic Analysis of Vibrio diabolicus and Six Taxonomic Synonyms: A First Look at the Distribution and Diversity of the Expanded Species. Frontiers in Microbiology, 9(1893). doi:10.3389/fmicb.2018.01893Go to metadata icon

Vieweg, I., E. Bilbao, J. P. Meador, I. Cancio, M. L. Bender, M. P. Cajaraville, J. Nahrgang. 2018. Effects of dietary crude oil exposure on molecular and physiological parameters related to lipid homeostasis in polar cod (Boreogadus saida). Comparative Biochemistry and Physiology, Part C: Toxicology and Pharmacology, 206-207:54-64. doi:10.1016/j.cbpc.2018.03.003Go to metadata icon

Waples, RS.  2018.  Null alleles and FIS×FST correlations.  Journal of Heredity 109:457-461.Go to metadata icon

Waples RS, Scribner K, Moore J, Draheim H, Etter D, Boersen, M.  2018.  Accounting for age structure and spatial structure in eco-evolutionary analyses of a large, mobile vertebrate.  Journal of Heredity 109:709-723Go to metadata icon

Waples RS, Grewe PG, Bravington MV, Hillary R, Feutry P.  2018.  Robust estimates of a high Ne/N ratio in a top marine predator, southern bluefin tuna. Science Advances 4:eaar7759.Go to metadata icon

Waples RS, R Kays, R Fredrickson, K Pacifici, and LS Mills.  2018.  Is the red wolf a listable unit under the U.S. Endangered Species Act?  Journal of Heredity 109:585-597.Go to metadata icon

Waples RS, S Mariani, and C. Benvenuto. 2018.  Consequences of sex change for effective population size.  Proc Royal Soc. London, B., 285:20181702Go to metadata icon

Waples, R.S., and S. T. Lindley.  2018.  Genomics and conservation units:  The genetic basis of adult migration timing in Pacific salmonids.  Evolutionary Applications 11:1518-1526 (doi: 10.1111/eva.12687).Go to metadata icon

Ward, E. J., K. Oken, K. A. Rose, S. Sable, K. Watkins, M. D. Scheuerell, E. E. Holmes. 2018. Applying spatiotemporal models to monitoring data to quantify fish population responses to the Deepwater Horizon oil spill in the Gulf of Mexico. Environmental Monitoring and Assessment.Go to metadata icon

Warlick, A., E. Steiner, M. Guldin. 2018. History of the West Coast Groundfish Trawl Fishery: Tracking Fishery Characteristics and Economic Performance across Different Management Policies. Marine Policy.Go to metadata icon

Waters, C. D., J. J. Hard, M. S. Brieuc, D. E. Fast, K. I. Warheit, C. M. Knudsen, W. J. Bosch, K. A. Naish. 2018. Genome-wide association analyses of fitness traits in captive reared Chinook salmon: Applications in evaluating conservation strategies. Evolutionary Applications.Go to metadata icon

Watson, J., E. Fuller, F. Castruccio, J. F. Samhouri. 2018. Fishermen Follow Fine-scale Physical Ocean Features For Finance. Science.Go to metadata icon

Wetzel, C. R., A. E. Punt, J. M. Cope. 2018. The effect of reduced data on the ability to monitor rebuilding of overfished fish stocks. Fishery Bulletin, 116(190-206):16. doi:doi: 10.7755/FB.116.2.8Go to metadata icon

Winans, G. A., M. B. Allen, J. Baker, E. Lesko, F. Shrier, B. Strobel, J. M. Myers. 2018. Dam trout: Genetic variability in O. mykiss above and below barriers in three Columbia River systems prior to restoring migrational access. PLoS ONE.Go to metadata icon

Zeman, S. M., M. Corrales-Ugalde, R. D. Brodeur, K. R. Sutherland. 2018. Trophic ecology of the neustonic cnidarian Velella velella in the northern California Current during an extensive bloom year: insights from gut contents and stable isotope analysis. Marine Biology, 165:150. doi: to metadata icon