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Albergaria-Barbosa, A. C., D. A. da Silva, A. J. Rocha, S. Taniguchi, J. F. Dias, V. F. Patire, W. S. Fernandez, R. C. Figueira, M. C. Bicego. In press. Evaluation of Polycyclic Aromatic Hydrocarbons bioavailability on Santos Bay (Brazil) through biliary metabolites concentrations. Marine Pollution Bulletin.
Andrews, K. S., K. M. Nichols, A. Elz, N. Tolimieri, C. J. Harvey, R. Pacunski, D. Lowry, K. L. Yamanaka, D. M. Tonnes. In press. Cooperative research sheds light on the listing status of threatened and endangered rockfish species. Conservation Genetics.
Arkoosh, M. R., A. L. Van Gaest, S. A. Strickland, G. P. Hutchinson, A. B. Krupkin, J. P. Dietrich. In press. Disruption of thyroid hormone concentrations in juvenile Chinook salmon (Oncorhynchus tshawytscha) exposed to polybrominated diphenyl ethers, BDE-47 and BDE-99. Chemosphere, 171:1-8. doi:DOI: 10.1016/j.chemosphere.2016.12.035
Brainard, R. E., C. Birkeland, C. M. Eakin, P. McElhany, M. Patterson, G. A. Piniak, M. Dunlap, M. Weijerman. In press. Incorporating Climate and Ocean Change into Extinction Risk Assessments for 82 Coral Species. Conservation Biology.
Breslow, S. J., A. Margaret, D. Holstein, B. Sojka, R. Barnea, X. Basurto, C. Carothers, S. Charnley, S. Coulthard, N. Dolsak, J. Donatuto, C. Garcia-Quijano, C. Hicks, A. Levine, M. B. Mascia, K. C. Norman, M. R. Poe, T. Satterfield, K. St. Martin, P. S. Levin. In press. Evaluating Indicators of Human Wellbeing for Ecosystem-Based Management. Ecosystem Health & Sustainability, (12). doi:10.1080/20964129.2017.1411767
Brodeur, R. D., M. E. Hunsicker, A. Hann, T. W. Miller. In press. Effects of warming ocean conditions on feeding ecology of small pelagic fishes in a coastal upwelling ecosystem: a shift to gelatinous food sources. Marine Ecology Progress Series.
Chittaro, P. M., L. L. Johnson, D. J. Teel, P. Moran, S. Y. Sol, K. H. Macneale, R. W. Zabel. In press. Variability in the performance of juvenile Chinook salmon is explained primarily by when and where they resided in estuarine habitats. Ecology of Freshwater Fish.
Cruz-Acevedo, E., N. Tolimieri, H. Aguirre-Villaseñor. In press. Deep-sea fish assemblages (300-2100 m) in the Eastern Pacific off Northern Mexico. Marine Ecology Progress Series. doi:https://doi.org/10.3354/meps12502.
Ecotoxicol Environ Saf. 2017 Aug;142:157-163. doi: 10.1016/j.ecoenv.2017.03.044. Epub 2017 Apr 11
Faber-Hammond, J., R. B. Phillips, L. K. Park. In press. The Sockeye Salmon Neo-Y Chromosome is a Fusion between the Coho Y Chromosome and the Long Arm of Rainbow Trout Omy2. Cytogenetic and genome research, 136(1):69-74.
Guzman, J. M., J. A. Luckenbach, D. A. da Silva, E. S. Hayman, G. M. Ylitalo, F. W. Goetz, P. Swanson. In press. Seasonal variation of pituitary gonadotropin subunit, brain-type aromatase and sex steroid receptor mRNAs, and plasma steroids during gametogenesis in wild sablefish. Comparative Biochemistry and Physiology Part A: Physiology.
Hale, M., G. McKinney, F. P. Thrower, K. M. Nichols. In press. Evidence of sex-bias in gene expression in the brain transcriptome of two populations of rainbow trout (Oncorhynchus mykiss) with divergent life histories. PLoS ONE.
Hall, J. E., T. P. Khangaonkar, C. A. Rice, J. W. Chamberlin, T. Zackey, F. E. Leonetti, M. Rustay, K. L. Fresh, A. N. Kagley, M. Rowse. In press. Characterization of annual salinity and temperature patterns in a large river delta to support tidal wetland habitat restoration efforts. Northwest Science.
Harding, L. B., I. R. Schultz, D. A. da Silva, G. M. Ylitalo, D. Ragsdale, S. I. Harris, S. Bailey, B. V. Pepich, P. Swanson. In press. Wastewater treatment plant effluent alters pituitary gland gonadotropin mRNA levels in juvenile coho salmon (Oncorhynchus kisutch). Aquatic Toxicology.
Haver, S., J. Gedamke, L. Hatch, R. Dziak, S. Van Parijs, M. McKenna, J. Barlow, C. Berchok, E. DiDonato, M. B. Hanson, J. Haxel, M. M. Holt, D. Lipski, H. Matsumoto, C. Meinig, D. Mellinger, S. Moore, E. M. Oleson, M. Soldevilla, H. Klinck. In press. Monitoring Long-Term Soundscape Trends in U.S. Waters: The NOAA/NPS Ocean Noise Reference Station Network. Marine Policy.
Heery, E., A. Y. Green, B. E. Feist, K. P. Sebens. In press. Urbanization-related distribution patterns and habitat-use by giant Pacific octopus (Entroctopus dofleini). Urban Ecosystems. doi:10.1007/s11252-018-0742-1
Hernandez-Ortz, J. S., D. I. Hernandez-Mena, G. Alama-Bermejo, R. Kutcha, K. C. Jacobson. In press. Morphological and molecular characterisation of Aporocotyle margolisi Smith, 1967 (Digenea: Aporocotylidae) from the North Pacific hake Merluccius productus (Ayres) (Gadiformes: Merlucciidae) off Oregon. Systematic Parasitology.
Hess, J. E., R. D. Vetter, P. Moran. In press. A steep genetic cline in yellowtail rockfish, Sebastes flavidus, suggests regional isolation across the Cape Mendocino faunal break. Canadian Journal of Fisheries and Aquatic Sciences.
Jackson, T. M., G. C. Roegner, K. g. OMalley. In press. Evidence for isolation by distance and inter-annual variation in genetic structure of Dungeness crab (Cancer magister) along the U.S. west coast. Molecular Ecology. doi:doi: 10.1111/mec.14443
Kaplan, I. C., T. B. Francis, A. E. Punt, L. E. Koehn, E. N. Curchitser, F. Hurtado-Ferro, K. F. Johnson, S. Lluch-Cota, W. J. Sydeman, T. E. Essington, N. G. Taylor, K. K. Holsman, A. D. MacCall, P. S. Levin. In press. A multi-model approach to understanding the role of Pacific sardine in the California Current food web. Marine Ecology Progress Series.
Kiffney, P. M., N. Sean, C. Jeremy, M. Liermann, D. G. Burrows. In press. Multiple pathways of carbon and nitrogen incorporation by consumers across an experimental gradient of salmon carcass inputs. Ecosphere.
Lema, S. C., M. I. Chow, E. J. Reiner, A. A. Westman, A. H. Dittman, D. May, K. M. Hardy. In press. Endocrine and metabolic impacts of warming aquatic habitats: differential responses between recently-isolated populations of a eurythermal desert pupfish. Conservation Physiology.
Leonard, J. L., E. Steiner. In press. Initial Economic Impacts of Pacific Coast Groundfish Fishery Individual Fishing Quota Program. North American Journal of Fisheries Management, 37(4):862-881. doi:10.1080/02755947.2017.1330784
Levin, P. S., T. E. Essington, K. N. Marshall, L. E. Koehn, L. Anderson, A. Bundy, C. Carothers, F. Coleman, L. R. Gerber, J. H. Grabowski, E. Houde, O. Jensen, C. Möllmann, K. A. Rose, J. N. Sanchirico, A. D. Smith. In press. Building effective Fishery Ecosystem Plans. Marine Policy.
Lomeli, M. J., W. W. Wakefield, B. Herrmann. In press. Illuminating the Headrope of a Selective Flatfish Trawl: Effect on Catches of Groundfishes Including Pacific Halibut. Marine and Coastal Fisheries.
Masi, M., C. H. Ainsworth, I. C. Kaplan, M. J. Schirripa. In press. Evaluation of robust single-species harvest control rules for managing reef fish in the Gulf of Mexico. Marine and Coastal Fisheries.
Murdoch, A. R., C. J. Herring, C. H. Frady, K. E. See, C. E. Jordan. In press. Estimating observer error and steelhead redd abundance using a modified Gaussian area-under-the-curve framework. Canadian Special Publication of Fisheries and Aquatic Sciences.
Naish, K. A., R. B. Phillips, M. S. Brieuc, L. Newton, A. Elz, L. K. Park. In press. Comparative genome mapping between Chinook salmon (Oncorhynchus tshawytscha) and rainbow trout (O. mykiss) based on homologous microsatellite loci. Genes, Genomes, Genetics, 3(12):2281-2288. doi:10.1534/g3.113.008003
Neely, M. G., J. S. Morey, P. Anderson, B. C. Balmer, G. M. Ylitalo, E. S. Zolman, T. Speakman, C. Sinclair, M. Bachman, K. Huncik, J. R. Kucklick, P. E. Rosel, K. L. Mullin, T. K. Rowles, L. H. Schwacke, F. M. Van Dolah. In press. Skin Transcriptomes of common bottlenose dolphins (Tursiops truncatus) from the Northern Gulf of Mexico and Southeastern U.S. Atlantic Coast. Marine Genomics.
Olsen, E., I. C. Kaplan, C. H. Ainsworth, G. Fay, S. K. Gaichas, R. J. Gamble, R. Girardin, H. N. Morzaria Luna, C. Hansen, K. Johnson, M. Savina-Rolland, H. M. Townsend, M. Weijerman, E. A. Fulton, J. S. Link. In press. Ocean futures as explored using a worldwide suite of ecosystem models. Frontiers in Marine Science.
Sato, M., J. A. Barth, K. J. Benoit-Bird, S. D. Pierce, T. J. Cowles, R. D. Brodeur, W. T. Peterson. In press. Upwelling front as a boundary for planktivorous fish distributions. Marine Ecology Progress Series.
Seixas, G. B., T. J. Beechie, C. Fogel, P. M. Kiffney. In press. Influence of channel width on stream shade and temperature change in a forested catchment. Journal of American Water Resources Association.
Thom, R. M., S. A. Breithaupt, H. L. Diefenderfer, A. Borde, G. C. Roegner, G. Johnson, D. L. Woodruff. In press. Storm-Driven Particulate Organic Matter Flux Connects a Tidal Tributary Floodplain Wetland, Main Stem River, and Estuary. Ecological Applications.
Waples, R. S., A. R. Hoelzel, O. E. Gaggiotti, R. Tiedemann, P. Palsboll, F. Cipriano, J. A. Jackson, J. W. Bickham, A. R. Lang. (in press). Guidelines for Genetic Data Analysis. Journal of Cetacean Research and Management.
Williamson, K. S., B. P. May. In press. Mitochondrial DNA haplotype diversity in apparent XY-female Fall- and Spring-Run Chinook Salmon in California's Central Valley. Transactions of the American Fisheries Society.